Transcript Information: S_Transcript_84578.p1


Annotated TAIR IDAT1G08540.1
Annotated Gene NameRNApolymerase sigma subunit 2
Annotated Gene Symbol(s)SIGB, SIG1, SIG2, SIGA, ATSIG1, ABC1, ATSIG2
Annotation TypeOrtholog
Chromosome Positionchr1:2703461-2706696 | Forward length=572
E-Value5.6E-106
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.885237978999
Replicate 215.581066071691
Replicate 321.464427306337
Condition 2: 8 Hour
Replicate 125.662757839262
Replicate 233.620970272132
Replicate 329.264129762771
Condition 3: 24 Hour
Replicate 123.449309961655
Replicate 222.023590910349
Replicate 319.664644790429


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_84578.p1 GENE.S_Transcript_84578~~S_Transcript_84578.p1 ORF type:5prime_partial len:177 (-),score=37.53,Sigma70_r2|PF04542.10|3.9e-17,Sigma70_r3|PF04539.12|6.2e-14 S_Transcript_84578:239-769(-)
GGGGGTGAGCCATCCTTTGCACAGTGGGCAGCTGCAGCAAGTATTGATCAGAGGACACTAAGAAAGCGTGTAAACCATGGTATTATTTGCAAAGATAGGATGATCAAAAGCAACATAAGACTTGTTATATCCATTGCCAAAAATTATCAAGGAGCTGGAATGAACCTTCAGGATCTTGTTCAGGAAGGATGCCGAGGCCTGGTCAGGGGTGCAGAAAAGTTTGATGCTTCCAAAGGTTTTAAGTTCTCAACTTATGCTCAATTGTGGGTAAAACAAGCAATTCGAAAATCTCTTTCTGATCAGTCCAGGACTTTTCGGTTACCTTTTCACAAAGTTGAGGCAACTTATAGAGTAAAAGAAGCAAGGAAACAACTTTATAGCGAAAATGGAAGGCAGCCTGATAATGAGGAAGTTGCAGAGGCAACGGGGCTCTCAATGAAGAGGCTAAATGCTGTGCTTTTGACCCCCAAGGCTCCAAGGTCACTCGACCAGAAGGTTGGGATGAATATGAATCTTAAACCCTTGGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_84578.p1 GENE.S_Transcript_84578~~S_Transcript_84578.p1 ORF type:5prime_partial len:177 (-),score=37.53,Sigma70_r2|PF04542.10|3.9e-17,Sigma70_r3|PF04539.12|6.2e-14 S_Transcript_84578:239-769(-)
GGEPSFAQWAAAASIDQRTLRKRVNHGIICKDRMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAQLWVKQAIRKSLSDQSRTFRLPFHKVEATYRVKEARKQLYSENGRQPDNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKVGMNMNLKPLV*

Click here to download the sequence:
Link to NCBI Protein BLAST