Transcript Information: S_Transcript_84586.p1


Annotated TAIR IDAT1G08540.1
Annotated Gene NameRNApolymerase sigma subunit 2
Annotated Gene Symbol(s)SIGB, SIG1, SIG2, SIGA, ATSIG1, ABC1, ATSIG2
Annotation TypeOrtholog
Chromosome Positionchr1:2703461-2706696 | Forward length=572
E-Value4.3E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.167018884262
Replicate 228.393850908802
Replicate 333.357296568599
Condition 2: 8 Hour
Replicate 133.007995447389
Replicate 227.04075618193
Replicate 335.588197740491
Condition 3: 24 Hour
Replicate 121.464972473366
Replicate 230.743953094871
Replicate 325.880010780902


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_84586.p1 GENE.S_Transcript_84586~~S_Transcript_84586.p1 ORF type:5prime_partial len:115 (+),score=18.08,Sigma70_r4|PF04545.12|4.6e-20 S_Transcript_84586:1-345(+)
CCCTCGGAAGTGATTGCAGACCCTGAAGCAGAAACTGCTGAAGACTTACTGACCAAGCAGTTCATGAAGCAGGATCTCGAGAAGGTGCTGGATACACTCAGTTCGAGGGAGAAGCAGGTCATAAGATGGAGATTCGGACTAGAAGATGGAAGAATGAAAACGTTACAGGAGATTGGCGAGCTGATGGGCGTCAGCCGGGAAAGAATTAGGCAAATTGAGTCATCTGCCTTCAGGAAGCTGCAAAGTTATTTTTTGGAGGATGTGGATGTGGCATGCTGTTGGAAGAGTTCGGTACAAAGCTCCTATTTTGTGCACTTCTTATCAAAGTGTTGGTATAATTTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_84586.p1 GENE.S_Transcript_84586~~S_Transcript_84586.p1 ORF type:5prime_partial len:115 (+),score=18.08,Sigma70_r4|PF04545.12|4.6e-20 S_Transcript_84586:1-345(+)
PSEVIADPEAETAEDLLTKQFMKQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLQSYFLEDVDVACCWKSSVQSSYFVHFLSKCWYNL*

Click here to download the sequence:
Link to NCBI Protein BLAST