Transcript Information: S_Transcript_8466.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value5E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27087024157945
Replicate 20.33683648179412
Replicate 30.28156848982596
Condition 2: 8 Hour
Replicate 10.9767354343725
Replicate 21.2523681172366
Replicate 31.2474923534722
Condition 3: 24 Hour
Replicate 10.50026450741819
Replicate 20.17300619523929
Replicate 30.32089115019232


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_8466.p1 GENE.S_Transcript_8466~~S_Transcript_8466.p1 ORF type:complete len:393 (+),score=64.49,RVT_1|PF00078.23|2.9e-47 S_Transcript_8466:1374-2552(+)
ATGGGTGATAATAAGAGCCATGGGCCTGATGGGTTTGGGGCTGGGTTCTTTAAAAAAGCCTGGAGGATTGTGGGGAAGGATATCTATGCAGCAGTGAAGGAGTTTTTTCAGAATGGCAAAATGCTCAAGCAACTCAACTCCACTCTTATTGTCCTTATTCCTAAGGTTGAGGTCCCTCTGAAAGTCACAGAATATAGACCCATAGCACTTTGTAATGTCCTTTATAAAATCATCACTAAAGTACTGGCAAATAGGATGCAGATAGTCATGGATCAAGTGGTTGGGCTAGAACAGGCTGCTTTCATCAAAGGGAGATTATTGTATGAAAATGTACAGTTAGCTCATGAACTATCCCAGCACTATAATAGAGCTCATATTTCCCCAAGAGTAATCATGCAACTGGACATTCAAAAGGCCTATGATACTGTCAGATGGGAGTTTATTGAAGCAGTACTTCTATCATTTAGCTTCCCTACTGAGTTCACCTCCAAGATCATGGCCTGTATCACTTCCTCTAGATTTTCTATTAGCATAAATGGTTGGTACAAGGGATACTTTGAAGGAAAATGTGGTCTGAGGCAAGGAGATCCCCTTTCTCCTTACCTCTTTGTTTTGTGTATGGAAGGCCTTTCAAGGTCTTTGAGACATCTCAGGGAGATTAAAAACTTCTCTTACCACCCTAAGTGTAGTAGGCTTGGTATCACTCATCTCTCTTTTGCTGATGACCTCCTAATTTTCACAAGGGGTGATGTGCCATCAGTCCAAGCTGCAGTTGATAGTGTAAATGAGATCTTCCATATGTCTGAACTGTTTATTAATGCTCAAAAGACCAGTATTTTCTTTGGTGGAGTTTATGAGAATGTTAAAAGAGATATACTTGCAGCTACTGGATTCAAAGAAGGTAGATTGCATGTTAGATATCTTGGTCTGCCTCTGTGTGTTGTAGGTATCAAGCCTTATATGTGCACTGGTCTCATTGAGAAAATTCAGAAGAAGCTGAGACAGTGGAATGCGCAGACTATGTCTTATGCCGGTAGACTTGAATTGGTAAACTCAATCCTTTTTGGGATTGAAACCTTCTGGAGTGGTGTCTTCCTGCTGCCTAAAGTAGTTATTGAAAAATTGAAAAAGTGTGTAGACAGTTTGTGTGGGGGGTTCCTGAAAATAGCAGGAGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_8466.p1 GENE.S_Transcript_8466~~S_Transcript_8466.p1 ORF type:complete len:393 (+),score=64.49,RVT_1|PF00078.23|2.9e-47 S_Transcript_8466:1374-2552(+)
MGDNKSHGPDGFGAGFFKKAWRIVGKDIYAAVKEFFQNGKMLKQLNSTLIVLIPKVEVPLKVTEYRPIALCNVLYKIITKVLANRMQIVMDQVVGLEQAAFIKGRLLYENVQLAHELSQHYNRAHISPRVIMQLDIQKAYDTVRWEFIEAVLLSFSFPTEFTSKIMACITSSRFSISINGWYKGYFEGKCGLRQGDPLSPYLFVLCMEGLSRSLRHLREIKNFSYHPKCSRLGITHLSFADDLLIFTRGDVPSVQAAVDSVNEIFHMSELFINAQKTSIFFGGVYENVKRDILAATGFKEGRLHVRYLGLPLCVVGIKPYMCTGLIEKIQKKLRQWNAQTMSYAGRLELVNSILFGIETFWSGVFLLPKVVIEKLKKCVDSLCGGFLKIAGG*

Click here to download the sequence:
Link to NCBI Protein BLAST