Transcript Information: S_Transcript_84875.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6290456229792
Replicate 23.6771315929191
Replicate 35.1695548113123
Condition 2: 8 Hour
Replicate 13.2311197450202
Replicate 24.4065762472189
Replicate 33.8756086554511
Condition 3: 24 Hour
Replicate 17.1161362886027
Replicate 28.7564726544979
Replicate 34.7769023494538


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_84875.p1 GENE.S_Transcript_84875~~S_Transcript_84875.p1 ORF type:internal len:132 (-),score=18.83,rve|PF00665.22|1.4e-14 S_Transcript_84875:3-395(-)
TGTAAACGTGGTTTGCTTGGCTCACTTACTAATTGTGATATTGATTTTTGTGAGTATTGTGTTTATGGTAAGCAAAAGAAAGTAAACTTCTCACCAGGCATACATAGAAACAAGGCAAAACTTGATTATGTCCACTCCGACTTGTGGGGTCCTTCACAAGTTGCCAATGGCGGAGGTAATTGCTATATGATGACTATTATTGATGATTACTCACGTAAGGTTTGGGTGTATTTCTTGAAGCATAAGAATAAGGCTCTAGACAAATTCAAGGAGTGGAAGACATTACTTGAGAATCAAACCGACATGAAACTCAAAAGGTTGAGGACCGATAATGGCCTCAAGTTTTGTGATCGAGAGTTCAAAGAATTTCACAAGAAGGAAGGTGTTGCTAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_84875.p1 GENE.S_Transcript_84875~~S_Transcript_84875.p1 ORF type:internal len:132 (-),score=18.83,rve|PF00665.22|1.4e-14 S_Transcript_84875:3-395(-)
CKRGLLGSLTNCDIDFCEYCVYGKQKKVNFSPGIHRNKAKLDYVHSDLWGPSQVANGGGNCYMMTIIDDYSRKVWVYFLKHKNKALDKFKEWKTLLENQTDMKLKRLRTDNGLKFCDREFKEFHKKEGVAR

Click here to download the sequence:
Link to NCBI Protein BLAST