Transcript Information: S_Transcript_84880.p1


Annotated TAIR IDAT1G24706.2
Annotated Gene NameTHO2
Annotated Gene Symbol(s)THO2
Annotation TypeOrtholog
Chromosome Positionchr1:8742210-8755250 | Forward length=1823
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.313594867231
Replicate 213.737432037959
Replicate 315.69067992083
Condition 2: 8 Hour
Replicate 118.463690059869
Replicate 219.790019623333
Replicate 318.032085789292
Condition 3: 24 Hour
Replicate 115.032281607591
Replicate 213.904850580658
Replicate 314.052862100113


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_84880.p1 GENE.S_Transcript_84880~~S_Transcript_84880.p1 ORF type:complete len:1863 (+),score=446.67,Tho2|PF11262.4|5.1e-98,Tho2|PF11262.4|1.6e+04,THOC2_N|PF16134.1|2.3e-51,THOC2_N|PF16134.1|2.3e-22,Thoc2|PF11732.4|2.4e-30 S_Transcript_84880:275-5863(+)
ATGTCCCAGTCTCTTCCTCCCATAGAGCGTGCCTATGTAACAGATGATTTTGTATCAGAATTGAAAAATGGCAACTCTACTTACAAATTGCCCCACCCTGTTCCTCTCCTTCGCTTCCTTTACGAGCTATGCTGGTCCATGGTTCATGGAACTCTGCCGTTTCAGAAGTGTAAAGCCGCCTTGGATGCAGTCGAGTTTTCAGATTCAGTTTTGGAGGAGGAATTGGGTTCCAGTTTAGCAGATGTTGTCACTCAAATGGCTCTTGATCTGACCATGCCCATGGAATACCGTGCTCGGCTAATTAAACTGGCAAGATGGCTTGTGGAGTCTTCACTAGTACCAGTGAGGTTCTTTCAAGAGCGCTGTGAGGAAGAATTTCTCTGGGAGTGTGAAATGGTCAAGATTAAGGCCCAAGATCTAAAATCGAAAGAGGTCAGGGTGAACACTCGTTTATTGTACCAACAGACAAAGTTTAACCTTCTTCGGGAAGAGAGCGAGGGCTATGCTAAACTGGTGACCCAACTCTGTGAGGGTTCTGGAATTTTGAACTCTTCATCCTCAACAATTGGCACTATTAAGTCTTTAATTGGGCACTTTGACTTGGACCCCAATCGTGTTTTTGACATTGTTTTAGAGTGCTTTGAAATGCAGCCTAACAATGAGGCTTTTGTTGACTTAATTCCAATTTTCCCAAAGTCACATGCTTCACAAATCTTGGGCTTCAAATTTCAATACTACCAACGTATGGAAGTCCAAGACCCTGTTCCTTTTGGGTTGTATCAGCTTGCAGCTTTGCTTGTCAAACAGGATTTTGTGGATCTTGCTAGCATATATGCACATCTTCAGCCCAAGGATGAGGAAGCAATTGAGAATTCCAGTGCAATATATGCCAAGCGTCTTGATGAGGCCAACAAGATTGGAAAAATAAATCTTGCTGCAACTGGGAAGGACCTTATGGATGACGAGAAACAAGGAGATGTGACCATAGATCTCTATGCGGCTTTAGATATGGAACATCAAGCAGTCATTGAATCGTTTTCAGAACTGAAGAACAGCCAAACTTTGGGCTTGCTCACTGGTTTTCTTAATGTGGAGGACTGGTATCATGCGAATGTGCTTTTTCAGCGTCTCTCACCTCTTGTGCCAGTAGCGCATTCTCAGATTTGTTCTGGGTTGTTCAGGCTTATTGAAAAGTCAATATCTCCAGCATATGATATTGTTTGCAAAAATCGTTATGAACATTGTGGTATCATTTCCTCAAATGGTCATGAAGTTGTGGAGACTACCAATGCTTCAGGGAGTAGGTCACCAGTTTTGCTACCTAGAGATTTTTTTGAGATGCTTGTTTGTGTGGGACCTTATTTGTATCGTAATACTTTGTTGCTGCAGAAGGTTTGTAGAGTTCTAAGAGCTTACTATCTCTCGGCTCTTGAACTTGCACGTAAGGAGGATGGAGCTTCCAGGCCTGTCACTGGAGTTAATGTTGTTCCTCAGCTAAAAGAAGCTAGATTAAGGATCGAGGAAGCATTGGGATCATGTCTACTTCCTTCGTTACAATTAATACCTGCGAATCCTGCTGTTGGACAGGAGATTTGGGAAGTTATGAGTCTTCTTCCCTATGAGGTGAGATATCGTCTTTATGGTGAATGGGAAAAGGACGACGAGCAGATACCTATGATTTTGGCTGCGAGACAAACAGCTAAATTGGACACAAGAAGGATCCTGAAACGGCTTGCAAAAGAAAATTTGAAACAGCTGGGCCGCATGGTTGCTAAGCTTGCTCATGCGAATCCCTTGACTGTTCTCCGCACGATTGTTCACCAGATTGAAGCCTACCGTGATATGATTACTCCTGTTGTGGATGCTTTCAAGTACTTGACACAGCTGGAGTATGACATCTTGGAATATGTAGTGATTGAGCGATTGGCACAAAGTGGTCGTGAAAAACTTAAAGATGATGGGCTTAACTTATCAGATTGGCTTCAATCCCTGGCTTCTTTTTGGGGGCACCTGTGCAAGAAGTACCCTTCTATGGAGCTGAGGGGCCTCTTTCAGTATCTTGTTAATCAGTTGAAGAGGGGGCAAGGAATTGAACTTGTACTACTACAGGAACTAATGCAACAAATGGCAAATGTTCAGTACACTGAAAATATGACTGAAGACCAGTTGGACTCGATGGCTGGCGGTGAGACTCTGCGGTATCTTGCTACATCTTTTGGTGCTAGCCGAAATAATAAGGCATTAATTAAATCTACTAATAGACTGAGGGACTCTTTGCTCGCCAAGGACGAACCATCACTTGCAATTCCCCTTTTGCTCCTCATTGCACAACACCGTTCTGTGATTGTAATAAATGCAGATGCACCGTATATAAAGATGGTAAGTGAACTGTTTGACCGATGTCATGGAGTACTTCTTCAATATGTGGAATTCTTATGTAGCGCAATCAGTCCAGCAACTGCCTATGCACAATTGATACCAAACCTCCATGATCTTGTTCATTTGTACCACCTTGACCCTGAGGTGGCCTTTTTGATTTATCGTCCAGTTATGAGGCTTTTCAAGTGCCAAAGAAGGTCTACTTCCTGGCCCTTGTGTGATCATGAAAGCTCAATGGTAAAAGAAACTGAGCCAAATGGAGCTAGTGACCTGGTTTTGGATCTTAGTCCTCAGAATCCTCCTGTGAGGTGGTCTGATCTTCTTGATACAGTTCGAACTATGTTGCGTTCAAAAGCATGGAATAGCCTCTCTCCAGATTTGTATGCAACTTTTTGGGGTCTGACACTTTATGATCTTTATGTTCCTCGGAGTCGTTACGAGTCTGAAATTGCAAAGCAGTATGCTGCTTTAAAGGCTTTGGAAGAGCTCTCTGATAATTCAGGTTCTGCAATTGCTAAGAGGAAGAAAGACAAGGAGAGGATACAGGACTCCCTAGATCGTCTGACAAGTGAACTTCAAAAGCATGAAGAGAATGTTACATCTGTTCGTAAGAGGCTTGCTAGTGAAAAAGACAATTGGCTGAGTTCCTGTCCAGATACACTGAAGATCAACATGGAGTTTCTGCAGCGTTGCATTTTCCCTCGGTGTACATTCAGCATGCCTGATGCTGTTTACTGTGCAATGTTCGTCCATACTCTTCATTCCCTGGGAACACCCTTTTTTAACACAGTCAACCATATTGATGTTTTGATCTGTAAAACAATACACCCAATGATATGCTGCTGTACTGAATATGAAGCTGGTAGGCTTGGCAGATTTTTGTTTGAAACACTAAAAATTGCCTACTATTGGAAGAGTGATGAATCAGTGTATGAACGTGAATGTGGTAACATGCCTGGGTTTGCAGTCTATTATAGATATCCAAATAGTCAGCGAGTTACATATGGTCAGTTCATTAAGGTGCACTGGAAATGGAGTCAGAGAATTACCCGACTGTTGATACAGTGCCTGGAGTCTACAGAGTATATGGAAATTCGAAATGCTCTGATTATGCTAACGAAAATATCCAGTGTGTTTCCAGTTACTAGGAAAAGTGGGATTAACATTGAGAAACGAGTGGCAAAAATTAAAGGTGATGAAAGAGAAGACTTGAAGGTCTTGGCTACCAGTGTAGGGGCTGCTTTGGCTGCTAGAAAGCCTTCATGGGTGACAGAAGAAGAATTTGGGATGGGCTATCTTGAACTGAAGCCTGCACCATCAGCAGCTTCTAAGTCTGCCACAGGTAATGGTTCAGGCATTGGTGTGTCTCAAATTGAGTCCACTGGGGAAAAAGTGGCCTCTGAAGCACAAGTTACGGATTCTACAAATCCCCTGAAAGACCAAACATTTCGAACTAAGACCATTGATGGAAGATCAGAAAGGGCAGAAAGTTTCTCAGGAAATGTGAAGTTGAAAGGTGGTACAATCGCAAATGGGGCAGATATGCTGGTGACAGGTGCACACTCACATACAGTGTTAAGGTCAGCAGAGAATCAGAAGCATGTAGATGAGCCTCCAAACAAGAGTATGGAAGAAAATGCTGCCAAAGTAATGGCAAAGGCATCTACTGAGAGTGAGGCAAGAGTTGCTGTAAAACGGACGTCTTCTGGAGCTGGAACAAAGTCACTTAAACAAGAGCTTAAGGATGAGAATAAGTTAGCAAAAGCTTCTGGGAGAGGCAGTGGTGCATCTGTTGGTGAAAGAGATCAAATTGCATCAACTAATCTTTCTTCAGCTTCTGTTACTAATGGTTTTGCTGCTAACTCATCTAAAGCTTTAGCGTCATCCACACGAGCAGAAGTAGATGTTACTGAAGTGCGAGGAGATGGTGCATCCACAAAGTCTTCTGAGTTGAGGGGTTCTTCTGGGAGAGATGATGGTACTGATCTGTCTGATTTTCCGAAGCCTCTACATGGTCGTTCAGCTCAATCTTCTAGACATGATGCCGTTGCTAAATCCACTGAGAGACAACAGAAAAGATCTAGTCCTGCTGAAGAACCAGATAGGTTACATAAACGTAAGAAAGGTGATTCTGACACGAGAGATTTAGAAGTTGATATTCGATTGACTGATCGAGAACGGATTACTGAGCGTGCTATAGACAAATCTTATCCTGCAGATCTGGACAAGGCTGGGAGTGAGGAATTGACTACTGGTCGGGGTGCTGATAAACATTTGGATAGGACAAAAGACAAAAACTCTGATAAATTAGAGCGAGAGTACAGAGATCGATCAGATCGCATTGATAAACCTCGTACTGATGATATTTCATCTGAAAAGCTGAGAGACCGGTCAATGGAGCGATATGGAAGAGAGCGTTCTGTTGAAAGAATTCCAGAGCGAAGGATTGATAGGAGTTTTGATGGGCCTGGTGAGAAAAACAGGGATGAAAGAACCAAGGATGAGCGAGCTAAGTTGCGTTACAGTGAAATATCTGGTGATAAATCTCATAATGATGAGCGCTTTCATTGTCAGAACTTGCCACCTCCACCTCCTTTACCTCCTCATGTTGTTCCGCAATCAGTAAGCACTGCTCGAAGGGATGATGATGTTGACCGAAGATTTGCGACAGCAAGACATGCTCAAAGACTCTCTCCTAGACATGAAGAAAAAGAACGTAGACGTTCAGAGGAAAACTTGGTGGCTGCTCAGGATGATTTAAAACGAAGGAGAGAAGATGAATTTAGAGAAAGAAAGCGGGAAGAAAGGGATACTATGGCAATGAAGGTGGAGGAAAGGGAGAAGGAGCGAGAGCGGGAGAGAGATCGAGCAAGCCTTTTGAAAGAGGATATGGATTCAACTGCTGCATCAAAAAGACGGAAGCTTAAGCGAGAACATATTCCTGGTGGAGAACCAGGTGAATACTCTCCTGTTGCTCCACTATCTTCTATTCCGATAGGCATGACACAATCATATGATGGTAGAGAAAGGGGAGACAGAAAAGGTTCAATGATTCAGCGTCAAGGTTACTTTGAGGAATCCAGTATGAGGATGCATGTAAAAGAGCCAGCAAGCAAAATGACACGACGTGATATTGATCCCATGTATGATCGTGAGTGGGATGATGAGAAGAGGCTAAGAGCTGAAGCAAAACGGCGACACAGGAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_84880.p1 GENE.S_Transcript_84880~~S_Transcript_84880.p1 ORF type:complete len:1863 (+),score=446.67,Tho2|PF11262.4|5.1e-98,Tho2|PF11262.4|1.6e+04,THOC2_N|PF16134.1|2.3e-51,THOC2_N|PF16134.1|2.3e-22,Thoc2|PF11732.4|2.4e-30 S_Transcript_84880:275-5863(+)
MSQSLPPIERAYVTDDFVSELKNGNSTYKLPHPVPLLRFLYELCWSMVHGTLPFQKCKAALDAVEFSDSVLEEELGSSLADVVTQMALDLTMPMEYRARLIKLARWLVESSLVPVRFFQERCEEEFLWECEMVKIKAQDLKSKEVRVNTRLLYQQTKFNLLREESEGYAKLVTQLCEGSGILNSSSSTIGTIKSLIGHFDLDPNRVFDIVLECFEMQPNNEAFVDLIPIFPKSHASQILGFKFQYYQRMEVQDPVPFGLYQLAALLVKQDFVDLASIYAHLQPKDEEAIENSSAIYAKRLDEANKIGKINLAATGKDLMDDEKQGDVTIDLYAALDMEHQAVIESFSELKNSQTLGLLTGFLNVEDWYHANVLFQRLSPLVPVAHSQICSGLFRLIEKSISPAYDIVCKNRYEHCGIISSNGHEVVETTNASGSRSPVLLPRDFFEMLVCVGPYLYRNTLLLQKVCRVLRAYYLSALELARKEDGASRPVTGVNVVPQLKEARLRIEEALGSCLLPSLQLIPANPAVGQEIWEVMSLLPYEVRYRLYGEWEKDDEQIPMILAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPLTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLAQSGREKLKDDGLNLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKRGQGIELVLLQELMQQMANVQYTENMTEDQLDSMAGGETLRYLATSFGASRNNKALIKSTNRLRDSLLAKDEPSLAIPLLLLIAQHRSVIVINADAPYIKMVSELFDRCHGVLLQYVEFLCSAISPATAYAQLIPNLHDLVHLYHLDPEVAFLIYRPVMRLFKCQRRSTSWPLCDHESSMVKETEPNGASDLVLDLSPQNPPVRWSDLLDTVRTMLRSKAWNSLSPDLYATFWGLTLYDLYVPRSRYESEIAKQYAALKALEELSDNSGSAIAKRKKDKERIQDSLDRLTSELQKHEENVTSVRKRLASEKDNWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTIHPMICCCTEYEAGRLGRFLFETLKIAYYWKSDESVYERECGNMPGFAVYYRYPNSQRVTYGQFIKVHWKWSQRITRLLIQCLESTEYMEIRNALIMLTKISSVFPVTRKSGINIEKRVAKIKGDEREDLKVLATSVGAALAARKPSWVTEEEFGMGYLELKPAPSAASKSATGNGSGIGVSQIESTGEKVASEAQVTDSTNPLKDQTFRTKTIDGRSERAESFSGNVKLKGGTIANGADMLVTGAHSHTVLRSAENQKHVDEPPNKSMEENAAKVMAKASTESEARVAVKRTSSGAGTKSLKQELKDENKLAKASGRGSGASVGERDQIASTNLSSASVTNGFAANSSKALASSTRAEVDVTEVRGDGASTKSSELRGSSGRDDGTDLSDFPKPLHGRSAQSSRHDAVAKSTERQQKRSSPAEEPDRLHKRKKGDSDTRDLEVDIRLTDRERITERAIDKSYPADLDKAGSEELTTGRGADKHLDRTKDKNSDKLEREYRDRSDRIDKPRTDDISSEKLRDRSMERYGRERSVERIPERRIDRSFDGPGEKNRDERTKDERAKLRYSEISGDKSHNDERFHCQNLPPPPPLPPHVVPQSVSTARRDDDVDRRFATARHAQRLSPRHEEKERRRSEENLVAAQDDLKRRREDEFRERKREERDTMAMKVEEREKERERERDRASLLKEDMDSTAASKRRKLKREHIPGGEPGEYSPVAPLSSIPIGMTQSYDGRERGDRKGSMIQRQGYFEESSMRMHVKEPASKMTRRDIDPMYDREWDDEKRLRAEAKRRHRK*

Click here to download the sequence:
Link to NCBI Protein BLAST