Transcript Information: S_Transcript_84962.p1


Annotated TAIR IDAT4G27610.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27620.2); Has 1304 Blast hits to 1173 proteins in 200 species: Archae - 14; Bacteria - 115; Metazoa - 628; Fungi - 104; Plants - 95; Viruses - 8; Other Eukaryotes - 340 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:13785648-13787332 | Reverse length=334
E-Value3.2E-111
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.427769462204
Replicate 220.833484567507
Replicate 323.688910277469
Condition 2: 8 Hour
Replicate 121.575541523199
Replicate 223.749587119006
Replicate 320.440710166654
Condition 3: 24 Hour
Replicate 119.858984991449
Replicate 218.676044143559
Replicate 318.787094659529


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_84962.p1 GENE.S_Transcript_84962~~S_Transcript_84962.p1 ORF type:complete len:341 (+),score=78.89,Filament|PF00038.17|0.36,Filament|PF00038.17|0.00022,Spc7|PF08317.7|0.00083,Spc7|PF08317.7|0.094 S_Transcript_84962:116-1138(+)
ATGAAATCGAGAAACAATTATGGTCAGAGATTGAGGAGTAGTAGTAGTTGTCAAGGTCAAGGGGGAGAGGGGCCAAATTGGGTGCTGGTAGTAGGAGGGGCTTTGTTGAGTACATTATCGATTCGGTTAGGGTTTAAGTTGAAACAAGCACTTGATTCGAAACAGCGCGATACTAATAACAATTCCGTCTTAAAAGGTGGTGAGAGATCTGCTGATAGGAATTGTTTGGGAAATTGTCGCTCACATTCGAGTTTTCACTCATTTGGATTGGATGAAAACACTTGCTTCAATTGTGCTTCTGGAGAGCGTATGGTGGAGATTAAGAACCCTCCAAATGGTCAAAATTTGACAGAACCTGAGATCTCTCTTCCCTTAGTGACTGTTCCTCCCCCTGAATATGGCATGGTTTGGGTGACTTCCCCAGAGCGTGGTGATCCACCTCCAAAGCCGTTCCAGCAGTCAAGTAATTCAGACTCACCATGTGTCTCTGAGTCAGGTTCTGACATCTTTAGCAAGAGAGAAGTAATACAAAAGCTCAGGCAACAGTTGAAAAGAAGAGATGACATGATATTGGAGATGCAGGATCAGATCACTGAGCTGCAGAATGAGCTCAATGCCCGGATGTCTCATTCGAATCATTTACAGTCGCAGCTTGATTCAGTGCACAGGGAGCTCTTTGACTCGGAGAGGGAAATTCAGAGATTGAGGAAGGCTATTGCAGATCATTGTGTGGCACATACGGACCCAAATGAGAAGGTCTCTAACACTTTTGGTTGGCCATCAGAGGGGAGAAATGGTCATGCCAATGGCTTTCTTAATGGGGATACCAGTTTTGAACCTTCCGAGAAGAGCAAAGGAGATGAAAGAATTGAGATGCTGAAGAAGGAAATAGGAGAGCTGAGAGAAGTAATCGAAGGAAAAGAGTTCCTGTTGCAGAGCTACAAGGAGCAGAAGGCCGAGCTTGCCTCTAAGATCAAGGAGTTGCAACAAAGACTAGATTCTCAACTTCCACATATATTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_84962.p1 GENE.S_Transcript_84962~~S_Transcript_84962.p1 ORF type:complete len:341 (+),score=78.89,Filament|PF00038.17|0.36,Filament|PF00038.17|0.00022,Spc7|PF08317.7|0.00083,Spc7|PF08317.7|0.094 S_Transcript_84962:116-1138(+)
MKSRNNYGQRLRSSSSCQGQGGEGPNWVLVVGGALLSTLSIRLGFKLKQALDSKQRDTNNNSVLKGGERSADRNCLGNCRSHSSFHSFGLDENTCFNCASGERMVEIKNPPNGQNLTEPEISLPLVTVPPPEYGMVWVTSPERGDPPPKPFQQSSNSDSPCVSESGSDIFSKREVIQKLRQQLKRRDDMILEMQDQITELQNELNARMSHSNHLQSQLDSVHRELFDSEREIQRLRKAIADHCVAHTDPNEKVSNTFGWPSEGRNGHANGFLNGDTSFEPSEKSKGDERIEMLKKEIGELREVIEGKEFLLQSYKEQKAELASKIKELQQRLDSQLPHIL*

Click here to download the sequence:
Link to NCBI Protein BLAST