Transcript Information: S_Transcript_84978.p3


Annotated TAIR IDAT5G22330.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)ATTIP49A, RIN1
Annotation TypeOrtholog
Chromosome Positionchr5:7391026-7394071 | Reverse length=458
E-Value4.5E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5809264421212
Replicate 25.2444335833437
Replicate 33.0233993579673
Condition 2: 8 Hour
Replicate 16.2927381263671
Replicate 24.5843952130587
Replicate 34.3680015583978
Condition 3: 24 Hour
Replicate 14.4764105513513
Replicate 23.1580721049009
Replicate 33.5145471712047


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_84978.p3 GENE.S_Transcript_84978~~S_Transcript_84978.p3 ORF type:3prime_partial len:122 (+),score=17.46,TIP49|PF06068.9|9.3e-55 S_Transcript_84978:1354-1716(+)
ATGTTCGCTGTTCTGCTGAGTCAGGTTGTTAATCGTTATGTTGATGAAGGCGTTGCAGAGCTTGTGCCTGGAGTCTTATTTATTGATGAGGTTCATATGCTGGATATCGAGTGCTTTTCATACTTGAATCGAGCTCTAGAGAGCTCTCTATCCCCCATAGTCATCTTTGCAACAAATAGAGGAGTATGTGATGTGAGAGGAACTACAATGAAGAGTCCTCATGGAATACCTGTGGACCTGTTAGACCGACTATTGATAATCCGAACGGAAACTTATGGCCCAGCTGAGATGATACAGATTTTAGCAATTCGTGCTCAGGTTGAGGAATTGATTATAGATGAGGAAGGGCTTGCTTATATAGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_84978.p3 GENE.S_Transcript_84978~~S_Transcript_84978.p3 ORF type:3prime_partial len:122 (+),score=17.46,TIP49|PF06068.9|9.3e-55 S_Transcript_84978:1354-1716(+)
MFAVLLSQVVNRYVDEGVAELVPGVLFIDEVHMLDIECFSYLNRALESSLSPIVIFATNRGVCDVRGTTMKSPHGIPVDLLDRLLIIRTETYGPAEMIQILAIRAQVEELIIDEEGLAYIG

Click here to download the sequence:
Link to NCBI Protein BLAST