Transcript Information: S_Transcript_84985.p1


Annotated TAIR IDAT1G04990.2
Annotated Gene NameZinc finger C-x8-C-x5-C-x3-H type family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:1419368-1421454 | Reverse length=404
E-Value1E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9441715032412
Replicate 22.3929272838953
Replicate 32.2803383010092
Condition 2: 8 Hour
Replicate 13.8857544178724
Replicate 23.1058531734111
Replicate 33.2366796797152
Condition 3: 24 Hour
Replicate 11.5163476609523
Replicate 23.2938728321373
Replicate 32.1884637227867


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_84985.p1 GENE.S_Transcript_84985~~S_Transcript_84985.p1 ORF type:complete len:461 (+),score=75.45,zf-CCCH|PF00642.20|1e-08,zf-CCCH|PF00642.20|3.9e-09,zf-CCCH|PF00642.20|8.6e-08,zf-CCCH|PF00642.20|1.1e-10,zf-CCCH|PF00642.20|2.8e-08,Torus|PF16131.1|0.0029,Torus|PF16131.1|0.54,Torus|PF16131.1|1.3e+02,Torus|PF16131.1|0.81,Torus|PF16131.1|0.67,Torus|PF16131.1|1.2e+04 S_Transcript_84985:554-1936(+)
ATGCCTGATCATATGCAAAATCAAAGCAATGCAGACTCTAATTCCTCCAATGGACCAACTATTGATACCATTGAAGATGGTATGAAGGAGATGAAGGTTGAAAGCAAAGAAGAAGAAAATACTAAAAAGGAAGAAGATGAACAGAAAAAAGAGGAAGAAGAACAAGAAGGAGAGCAATCAAACAAATTCCCAGATCGTCCCGGAGAACCAGATTGCTTGTATTATCTAAGGACTGGTTTGTGTGGTTATGGCAGTAATTGTCGCTTTAATCACCCTCCTCATGCTGCTAAAACTGTTCAGCTGAGAAGTGAGCTCCCTCAAAGAGAAGGACAACCTGATTGTGGGTACTATGTAAAGACAGGGACTTGCAAATATGGATCAACTTGTAAATATCATCACCCCCTAGACAGGCGTGGTGTTGGGCAGGTTCCATTGAACACTTTAGGTCTACCTGTACGCCAGGAGGAGAAACCTTGCCCATATTATATGCGCAATTACACGTGCAAGTTTGGACCGGCTTGCAAATTTAATCATCCTGAACTCACTCCAGCTTTGTCCATTCCTGCTACTGGTGGGAATATGGGATCCCCCTTGCCCTCAAATGGTATGCCTTATGTTGGTGGAGTTCCTGCGTGGTCATTAACCAGGTCAACACATATGACGTCTTCACGAGCTCCTGGTCCACCGGCGTACATGCCTTTTGTTTACCCTCCTTTGCAAGGTCCTGTTGGTGCACAAAGTTGGAATGGTTATGTGGGAAACTTGAGCACAGTATCTGCAACGAATTTGGCGGGCACCAATCTGGTTTACAATACCAAAAATCAAGGTGAACTAGCAACCAACGGTCAGGTTGATTTGTTCACCATGACCATCCCGCATCTCCCACATAGACCCGATCAACCGGAATGTCGGTATTTCATGAGCACGGGGAGTTGTAAGTATGGTTCAAACTGCAAGTTCCATCATCCCAAAGAAAAGATTGTGCAGTCGGCAGTGACTAGTTTGGGCCCGCATGGGCTCCCAGTGAGACCGGGAGAAGACATATGTGCTTACTTTAGCTCATATGGAATATGCAAATATGGTCCAACATGCAAATTCAACCACCCATTCGGATGTTATATTCCCAGCTACTATTTTGGAATGTCATCTATTCCTATGGATCACTTTTTTTTTCCTAATCAGAGGAACACGATCATTGCCCATTCATCCGAGACTTCTCAATCTAAATCATCGAAGATCACCGATTGGATTCAGAAACCTGATACTGTTCAAGGCAAAAATCGTCGAATTTCAGAAACGAAAGTTGCAGAAAATTCACATGTTGATCAACAGCCTAATGCCACAGCTACGACTTCTGAACTTCCTCAAGATCAAGTTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_84985.p1 GENE.S_Transcript_84985~~S_Transcript_84985.p1 ORF type:complete len:461 (+),score=75.45,zf-CCCH|PF00642.20|1e-08,zf-CCCH|PF00642.20|3.9e-09,zf-CCCH|PF00642.20|8.6e-08,zf-CCCH|PF00642.20|1.1e-10,zf-CCCH|PF00642.20|2.8e-08,Torus|PF16131.1|0.0029,Torus|PF16131.1|0.54,Torus|PF16131.1|1.3e+02,Torus|PF16131.1|0.81,Torus|PF16131.1|0.67,Torus|PF16131.1|1.2e+04 S_Transcript_84985:554-1936(+)
MPDHMQNQSNADSNSSNGPTIDTIEDGMKEMKVESKEEENTKKEEDEQKKEEEEQEGEQSNKFPDRPGEPDCLYYLRTGLCGYGSNCRFNHPPHAAKTVQLRSELPQREGQPDCGYYVKTGTCKYGSTCKYHHPLDRRGVGQVPLNTLGLPVRQEEKPCPYYMRNYTCKFGPACKFNHPELTPALSIPATGGNMGSPLPSNGMPYVGGVPAWSLTRSTHMTSSRAPGPPAYMPFVYPPLQGPVGAQSWNGYVGNLSTVSATNLAGTNLVYNTKNQGELATNGQVDLFTMTIPHLPHRPDQPECRYFMSTGSCKYGSNCKFHHPKEKIVQSAVTSLGPHGLPVRPGEDICAYFSSYGICKYGPTCKFNHPFGCYIPSYYFGMSSIPMDHFFFPNQRNTIIAHSSETSQSKSSKITDWIQKPDTVQGKNRRISETKVAENSHVDQQPNATATTSELPQDQVD*

Click here to download the sequence:
Link to NCBI Protein BLAST