Transcript Information: S_Transcript_84986.p1


Annotated TAIR IDAT1G04990.2
Annotated Gene NameZinc finger C-x8-C-x5-C-x3-H type family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:1419368-1421454 | Reverse length=404
E-Value2E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9073026559441
Replicate 21.4832127433623
Replicate 30.72324455229806
Condition 2: 8 Hour
Replicate 11.4933746720681
Replicate 21.5039898245194
Replicate 31.4927064149147
Condition 3: 24 Hour
Replicate 10.91785224750396
Replicate 21.3966494528841
Replicate 32.6140494201381


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_84986.p1 GENE.S_Transcript_84986~~S_Transcript_84986.p1 ORF type:complete len:357 (+),score=60.89,zf-CCCH|PF00642.20|7.3e-09,zf-CCCH|PF00642.20|2.9e-09,zf-CCCH|PF00642.20|1.3e-06,zf-CCCH|PF00642.20|7.9e-11,Torus|PF16131.1|0.002,Torus|PF16131.1|0.39,Torus|PF16131.1|22,Torus|PF16131.1|0.11 S_Transcript_84986:588-1658(+)
ATGCCTGATCATATGCAAAATCAAAGCAATGCAGACTCTAATTCCTCCAATGGACCAACTATTGATACCATTGAAGATGGTATGAAGGAGATGAAGGTTGAAAGCAAAGAAGAAGAAAATACTAAAAAGGAAGAAGATGAACAGAAAAAAGAGGAAGAAGAACAAGAAGGAGAGCAATCAAACAAATTCCCAGATCGTCCCGGAGAACCAGATTGCTTGTATTATCTAAGGACTGGTTTGTGTGGTTATGGCAGTAATTGTCGCTTTAATCACCCTCCTCATGCTGCTAAAACTGTTCAGCTGAGAAGTGAGCTCCCTCAAAGAGAAGGACAACCTGATTGTGGGTACTATGTAAAGACAGGGACTTGCAAATATGGATCAACTTGTAAATATCATCACCCCCTAGACAGGCGTGGTGTTGGGCAGGTTCCATTGAACACTTTAGGTCTACCTGTACGCCAGGAGGAGAAACCTTGCCCATATTATATGCGCAATTACATGTGCAAGTTTGGAGCGGCTTGCAAATTTAATCATCCAGAACTCTCTCCAGCTTTGTCCATACCTTCTACTGGTGGGAATATGGGATCCACTTTGTCCTCGAATGGTATGCCTTATGTCGGTGGAGTTCCTGCATGGACATTAAACAGGTCAACATATATGACATCTTCACGAGCTCCTGGTCCACCGGCGTACATGCCTTTTGTTTACCCTCCTTTGCAAGGTCCTGTTGGTGCACAAAGTTGGAATGGTTATGTGGGAAACTTGAGCACAATATCTACTAATCTGACGGGCACCAATATGGTTTACAATACCAAGAATCAAGGTGAACTAGCAACCAACGGTCAGGTTGATTTGTTGACTATGACCATCCCACATCTCCCAGATAGACCCGATCAACCGGAATGTCGGTATTTCATGAGCACGGGGAGTTGTAAGTATGGTTCAAACTGCAAGTTTCATCATCCCAAAGAAAAGATTGCGCAATCGGCAATGACTAGTTTGGGCCCGCATGGGCTCCCAGTGAGACCGGTATTTTTTCCTTTCTTCTATCACTCAGTTTGGATGAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_84986.p1 GENE.S_Transcript_84986~~S_Transcript_84986.p1 ORF type:complete len:357 (+),score=60.89,zf-CCCH|PF00642.20|7.3e-09,zf-CCCH|PF00642.20|2.9e-09,zf-CCCH|PF00642.20|1.3e-06,zf-CCCH|PF00642.20|7.9e-11,Torus|PF16131.1|0.002,Torus|PF16131.1|0.39,Torus|PF16131.1|22,Torus|PF16131.1|0.11 S_Transcript_84986:588-1658(+)
MPDHMQNQSNADSNSSNGPTIDTIEDGMKEMKVESKEEENTKKEEDEQKKEEEEQEGEQSNKFPDRPGEPDCLYYLRTGLCGYGSNCRFNHPPHAAKTVQLRSELPQREGQPDCGYYVKTGTCKYGSTCKYHHPLDRRGVGQVPLNTLGLPVRQEEKPCPYYMRNYMCKFGAACKFNHPELSPALSIPSTGGNMGSTLSSNGMPYVGGVPAWTLNRSTYMTSSRAPGPPAYMPFVYPPLQGPVGAQSWNGYVGNLSTISTNLTGTNMVYNTKNQGELATNGQVDLLTMTIPHLPDRPDQPECRYFMSTGSCKYGSNCKFHHPKEKIAQSAMTSLGPHGLPVRPVFFPFFYHSVWMS*

Click here to download the sequence:
Link to NCBI Protein BLAST