Transcript Information: S_Transcript_84987.p1


Annotated TAIR IDAT1G04990.2
Annotated Gene NameZinc finger C-x8-C-x5-C-x3-H type family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1419368-1421454 | Reverse length=404
E-Value2.3E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3044968274282
Replicate 22.7884235139209
Replicate 32.0855422178794
Condition 2: 8 Hour
Replicate 14.0664824108059
Replicate 23.7699789282023
Replicate 33.7810816150743
Condition 3: 24 Hour
Replicate 12.3249543404623
Replicate 22.5126176913911
Replicate 33.1877084946599


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_84987.p1 GENE.S_Transcript_84987~~S_Transcript_84987.p1 ORF type:3prime_partial len:451 (-),score=62.50,zf-CCCH|PF00642.20|9.8e-09,zf-CCCH|PF00642.20|3.8e-09,zf-CCCH|PF00642.20|1.8e-06,zf-CCCH|PF00642.20|1.1e-10,zf-CCCH|PF00642.20|1.5e-07,Torus|PF16131.1|0.015,Torus|PF16131.1|0.57,Torus|PF16131.1|28,Torus|PF16131.1|0.47,Torus|PF16131.1|1.5 S_Transcript_84987:1-1350(-)
ATGCCTGATCATATGCAAAATCAAAGCAATGCAGACTTTAATTCCTCCAATGGACCACCTATTGATACCATTGAAGATGGTATGAAGGAGATGAAGGTTGAAAGCAAAGTAGAAGAAAATATTAAAAAGGGAGAAGATGAACAGAAAAAAGAGGAAGAAGAACAAGAAGAAGGAGAACAATCAAACAAATACCCAGATCGTCCAGGAGAACCAGATTGCTTATATTATCTAAGGACTGGTTTGTGTGGTTATGGCAGTAATTGTCGCTTTAATCACCCTCCTCATGCTGCTAAAACTGTTCAGCAGAGAAGTGAGCTCCCTCAAAGAGAAGGACAACCTGATTGTGGGTACTATGTAAAGACAGGGACTTGCAAATATGGATCAACTTGTAAATATCATCACCCCCTAGACAGGCGTGGTGTTGGGCAGGTTCCATTGAACACTTTAGGTCTACCTGTACGCCAGGAGGAGAAACCTTGCCCATATTATATGCGCAATTACATGTGCAAGTTTGGAGCGGCTTGCAAATTTAATCATCCTGAACTCACTCCAGCTTTGTCCATACCTTCTACTGGTGGGAATATGGGATCCACTTTGTCCTCGAATGGTATGCCTTATGTCGATGGAGTTCCTGCGTGGACATTAAACAGGTCAACATATATGACATCTTCACGAGCTCCTGGTCCACCGGCGTACATGCCTTTTGTTTACCCTCCTTTGCAAGGTCCTGTTGCTGCACAAAGTTGGAACGGTTATGTGGGAAACTTAAGCACAATATCTACTAATCTGACGGGCACCAATATGGTTTACAATACCAAGAATCAAGGTGAACTAGCAACCAACGGTCAGGTTGATTTGTTGACTATGACCATCCCACATCTCCCAGATAGACCCGATCAACCGGAATGTCGGTATTTCATGAGCACGGGGAGTTGTAAGTATGGTTCAAACTGCAAGTTTCATCATCCCAAAGAAAAGATCGCGCAATCGACTATGACTAGTTTGGGCCCACATGGGCTCCCATTGAGACCGGGAGAAGACACATGTGCTTACTTTAGCTCATATGGAATATGCAAATATGGTCCAACATGCAAATTCAACCACCCATTCGGATGTTATATTCCCAGCTACTATTTTGGAATGTCATCTATTCCTATGGATCACTTTTTTTTTCCTAATCAGAGGAACACGATCATTGCCCATTCATCCGAGACTTCTCAATCCAAATCATTAAAGATCACTGATTGGATTCAGAAACCTGATACTGTTCAAGGCAAAAATCGTCGAAATTCAGAAATGAAAGTTGTAGAAAATTCACATGTTGATCAACAGCCTAATGCCACAGCTACG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_84987.p1 GENE.S_Transcript_84987~~S_Transcript_84987.p1 ORF type:3prime_partial len:451 (-),score=62.50,zf-CCCH|PF00642.20|9.8e-09,zf-CCCH|PF00642.20|3.8e-09,zf-CCCH|PF00642.20|1.8e-06,zf-CCCH|PF00642.20|1.1e-10,zf-CCCH|PF00642.20|1.5e-07,Torus|PF16131.1|0.015,Torus|PF16131.1|0.57,Torus|PF16131.1|28,Torus|PF16131.1|0.47,Torus|PF16131.1|1.5 S_Transcript_84987:1-1350(-)
MPDHMQNQSNADFNSSNGPPIDTIEDGMKEMKVESKVEENIKKGEDEQKKEEEEQEEGEQSNKYPDRPGEPDCLYYLRTGLCGYGSNCRFNHPPHAAKTVQQRSELPQREGQPDCGYYVKTGTCKYGSTCKYHHPLDRRGVGQVPLNTLGLPVRQEEKPCPYYMRNYMCKFGAACKFNHPELTPALSIPSTGGNMGSTLSSNGMPYVDGVPAWTLNRSTYMTSSRAPGPPAYMPFVYPPLQGPVAAQSWNGYVGNLSTISTNLTGTNMVYNTKNQGELATNGQVDLLTMTIPHLPDRPDQPECRYFMSTGSCKYGSNCKFHHPKEKIAQSTMTSLGPHGLPLRPGEDTCAYFSSYGICKYGPTCKFNHPFGCYIPSYYFGMSSIPMDHFFFPNQRNTIIAHSSETSQSKSLKITDWIQKPDTVQGKNRRNSEMKVVENSHVDQQPNATAT

Click here to download the sequence:
Link to NCBI Protein BLAST