Transcript Information: S_Transcript_85145.p1


Annotated TAIR IDAT4G31210.1
Annotated Gene NameDNA topoisomerase, type IA, core
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:15165280-15172534 | Forward length=1284
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7987049373609
Replicate 25.839613447812
Replicate 36.5594512125296
Condition 2: 8 Hour
Replicate 111.518180212645
Replicate 211.694795980403
Replicate 312.130110134183
Condition 3: 24 Hour
Replicate 12.4753920911591
Replicate 23.2055515132799
Replicate 33.4630764030184


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85145.p1 GENE.S_Transcript_85145~~S_Transcript_85145.p1 ORF type:complete len:1209 (+),score=255.51,Topoisom_bac|PF01131.16|3.3e-116,Toprim|PF01751.18|2.5e-21,Toprim|PF01751.18|2.3e+03,Toprim_C_rpt|PF13368.2|4.2e-11,Toprim_C_rpt|PF13368.2|0.00011,zf-C4_Topoisom|PF01396.15|7.9e-09,zf-C4_Topoisom|PF01396.15|3.2e+03 S_Transcript_85145:213-3839(+)
ATGATTTTAACAAGACTTCACTGGAATTTAATGGCCACTACTAGTCATCCTGCCTCTTCCCTTTTTGGGTCTTGCAAGTCCTCCCTTATTACTAAGACAAAATCCAGCTCATTACGAAGTTATGCAGCCTCTTATTTTCCATGTCCCTCCATGAGTTCCTGCCTTGTATGCGCAAAAGGATCACAACTAAGATTCAAAAAGGTTAGATTAGCTTGTAAGATGATGGCTCAGCAGTCAGAACCGATCAGGTCTGATCTGCATTCCAGTTCTTATAGATTTAGACTCCTTGTTGATGAATCAAGGAATGGCATTAGGATTAGGTCTCTGTCCTTATGCGAGTTTACAAGTCCCACCATGCCTTTCTCTACACTAGGCTTTAGGCTTTCGAGTAAGAATGTTAGGTTGACTTATGAAGCTTTTGCTAAGTGGATGTTCTCTACAAAAGCTACACCGAAATCTGATCTTAGTATTACAAGTAATAATAATCCCATGTTTGCTAAAGGTGGAAAAGATGGCCGTAACATGTCAAAGTCCGTTTTCTCCAATAAACACCGGAAGCGAGTCAAAGCATTGGCCACTCAAGGACATAGCGATGATAAGCCTGAAAATACATTTCCCAGTCAGTTGGGTAAGAAGGGTCTTCATAATCATCCAGTATCTGCTCACAAAAATGTCAACGCAGTGAATTCTACTGAAACGCTGGCTGAAGATGGACTGAAGAAAACCAAGTCAAAGAAGTCTGCCAAGTCTCCTTCTTCAAGTAAAGTTGACAGTAAGCTGGAGTCAAATACTGAATCAAAACAGAAGCCACGATCACGAAGCAAGAAGAAAAAGGAAGAGCTTCCTGATTCAGCGTCTTCTTCTGATGCTGTTCAAGCAAAAGGCTCTAAAAAAACTAAAAATCCAAACGGGCAGTCATCAGATACTTTTGAGAAAAGTTCAATTGAAAGTACAACCAAGGAAGAGACTGATCTTTCTCACTCAACCATAGTCTTGCCTAAGAAGAAAACATCCTCTAGGAAGAAGGGAAAATTGTTGAAAGAAGCTGATGTTGAGCAAAACACAAATGGTGCCTTACCTAGACACGAGGAGGATGTGAGGCCAGCAACTTCTAGCAGTTTGTCTCAAAAACCAAAACCGCCAACTGTTAATGGTATCAAGGCAATTAAATTGAAGCCATTGTACCCTCCTGTGGGGAAATCAGTTGTGGTGGTGGAGTCTGTCACGAAGGCAAAAGTTATACAGGGTTACCTTGGTGACATGTATGAAGTTCTACCAAGTTATGGTCACGTAAGGGATTTAGCTGCTAGGTCAGGCTCTGTCCGACCTGATGATGATTTCAGTATGGTATGGGAGGTTCCGTCCCCTGCTTGGACTCATCTTAAGAGTATCAAGGTTGCAATAAGTGGAGCAGATAATCTTATTCTTGCATCAGATCCCGACCGTGAAGGGGAGGCGATTGCTTGGCACATAATTGAAATGTTGCAACAACAGGATGCTTTGCGCAAAGATATAACAGTTGCTAGGGTTGTCTTTCAAGAAATTACCGAGTCTGCCGTCAAGAATGCTCTGCAAACTCCAAGAGATATTGATGTTAACTTAGTTCATGCATATCTTGCTCGTCGTGCACTCGATTATTTGATAGGATTTAACATTTCTCCTCTATTATGGAGAAAGCTGCCTGGTTGCCAATCTGCTGGGCGTGTACAATCAGCTGCTCTTTCTCTTATATGTGACAGAGAAATGGAAATCGAGGATTTCAAACCGCAGGAATATTGGACTGTGGAAGCGACATTCAGCTCTTCAAATGTATCTTCTGCAGTGGATAATTCTGCTCTTCGATCATACTTGACTCATTTTAATTTCAAAAAGTTAAATCAGCTGTCCGTTGGCTCAGAGACTGAGGCAAAGAACATTGAGCAGCTTGTGAGTTCGTCACATTTCAAGGTAACTGTTGCTAAGAGGACCAAAGTAAATAGAAACCCTCCTACTCCCTATATAACATCGACACTTCAGCAAGATGCTGCAAATAAGTTAAATTTTAGTGCTGCCTACACAATGAAGCTGGCACAGAAGTTGTATGAAGGTATTCAACTTTCAGACGGCAAAGCAGCTGGACTGATAACATACATGAGGACCGATGGTTTACACATATCTGATGAAGCTGTAAAGAACATATGTACCTTAGTTACGGAGAGATATGGGTCAGGGTTTGCTGCAAGTAGTCCACGTAAATTCTTTAAAAAGGTGAAGAATGCCCAAGAGGCACATGAAGCCGTTAGACCCACAGATATACGAAGACTGCCATCAATGCTTGTTGGAGCTCTTGATGCAGATTCCTTAAAGTTGTACACTTTGATTTGGGCACGTACCATGGCGTGTCAAATGGAAGCTGCAAAAGTTGAACAGATTCAACTTGATATTGGAAATGAGGAGGGTTCTATTTCCTTTCGAGCTGCATGTTCTGCTGTTGATTTTCCTGGGTTCAGGTCAGTCTATGAAGATCTGGAAACTCGGGCGATCAGAGACACTGAAAATGAAACCACCGACCGTGATGAACTTTATAAGACCCTCAGCAATCTAAAGCATGGAGATCCATTGTGTCTTGGAAATGTGGAACTCAAACAACACCATACTCAGCCTCCACCTCGCTACTCTGAGGCATCATTGGTGAAGAAGTTGGAGGAGCTGGGAATCGGAAGACCTTCGACATACGCAAGCACACTTAAAGTTTTACAAGATAGGAAGTATGTTATAGCAAAAAGCCGTGTTCTATACCCTGAATTCCGTGGCCGTATGGTGTCCGCCTTCCTATCCCACTATTTTACTGAGGTGACAGACTATAGCTTTACTGCTGACATGGAAACTGAACTTGACAATGTTTCTGGGGGCTCGACTGATTGGAAAGGGCTCCTCAAAGATTACTGGAGTAGATTCAGTACTTACTGTGACCGTGCTGGTAAAGTTCACATCCATCAGGTAGAGAAGATGTTAGAAAGAACTTACGGAAATTTTCTCTTCTCGTCTCTTCCTGATGAAAGCCGTACATGCCCCAGCTGTTTGGAGGGCACTTTAATATTCAAAGTGAGCAGATTCGGTGCAGGATATTTTATAGGCTGTGATCAGCACCCCAAATGCAAGTTTATAGCTAAGACATTGTATGGTGAGGAGGAAGAAGATGATGCTCCTCAAAACAATGCTCCTGTTGAAGAGCCCAAGATATTGGGCACTCATCCTGTTTCTGGTGAAAAGGTTCTTCTGAAGAGTGGTCCTTATGGAAGTTATATTCAGCTTGGTGAAGATCGGAAGGGATATTCGCCTAAGCGAGCATCGCTTTCTCAGATCAAAAATGTTAGCTCAGTTACTCTGGAGGACGCCCTAGATTTGCTTCGCTATCCAATCACATTGGGTAATCATCCTGTGGATGGCCAGCCGATAATAATAAAGATTGCAAAAATGGGTTTTACCATCAGGCATCGACGCAATATTGCTCCTGTACCAAAGAATTTGAATCCAAATGATATTGACATGGAGAAAGCATTGGAGCTTCTCTCAGGTAAAGATGTTCGAAGATGTGGCCGACCAAAAGGCAAACCTAAGCGTGAAGAAGCCATTGATGACTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85145.p1 GENE.S_Transcript_85145~~S_Transcript_85145.p1 ORF type:complete len:1209 (+),score=255.51,Topoisom_bac|PF01131.16|3.3e-116,Toprim|PF01751.18|2.5e-21,Toprim|PF01751.18|2.3e+03,Toprim_C_rpt|PF13368.2|4.2e-11,Toprim_C_rpt|PF13368.2|0.00011,zf-C4_Topoisom|PF01396.15|7.9e-09,zf-C4_Topoisom|PF01396.15|3.2e+03 S_Transcript_85145:213-3839(+)
MILTRLHWNLMATTSHPASSLFGSCKSSLITKTKSSSLRSYAASYFPCPSMSSCLVCAKGSQLRFKKVRLACKMMAQQSEPIRSDLHSSSYRFRLLVDESRNGIRIRSLSLCEFTSPTMPFSTLGFRLSSKNVRLTYEAFAKWMFSTKATPKSDLSITSNNNPMFAKGGKDGRNMSKSVFSNKHRKRVKALATQGHSDDKPENTFPSQLGKKGLHNHPVSAHKNVNAVNSTETLAEDGLKKTKSKKSAKSPSSSKVDSKLESNTESKQKPRSRSKKKKEELPDSASSSDAVQAKGSKKTKNPNGQSSDTFEKSSIESTTKEETDLSHSTIVLPKKKTSSRKKGKLLKEADVEQNTNGALPRHEEDVRPATSSSLSQKPKPPTVNGIKAIKLKPLYPPVGKSVVVVESVTKAKVIQGYLGDMYEVLPSYGHVRDLAARSGSVRPDDDFSMVWEVPSPAWTHLKSIKVAISGADNLILASDPDREGEAIAWHIIEMLQQQDALRKDITVARVVFQEITESAVKNALQTPRDIDVNLVHAYLARRALDYLIGFNISPLLWRKLPGCQSAGRVQSAALSLICDREMEIEDFKPQEYWTVEATFSSSNVSSAVDNSALRSYLTHFNFKKLNQLSVGSETEAKNIEQLVSSSHFKVTVAKRTKVNRNPPTPYITSTLQQDAANKLNFSAAYTMKLAQKLYEGIQLSDGKAAGLITYMRTDGLHISDEAVKNICTLVTERYGSGFAASSPRKFFKKVKNAQEAHEAVRPTDIRRLPSMLVGALDADSLKLYTLIWARTMACQMEAAKVEQIQLDIGNEEGSISFRAACSAVDFPGFRSVYEDLETRAIRDTENETTDRDELYKTLSNLKHGDPLCLGNVELKQHHTQPPPRYSEASLVKKLEELGIGRPSTYASTLKVLQDRKYVIAKSRVLYPEFRGRMVSAFLSHYFTEVTDYSFTADMETELDNVSGGSTDWKGLLKDYWSRFSTYCDRAGKVHIHQVEKMLERTYGNFLFSSLPDESRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKFIAKTLYGEEEEDDAPQNNAPVEEPKILGTHPVSGEKVLLKSGPYGSYIQLGEDRKGYSPKRASLSQIKNVSSVTLEDALDLLRYPITLGNHPVDGQPIIIKIAKMGFTIRHRRNIAPVPKNLNPNDIDMEKALELLSGKDVRRCGRPKGKPKREEAIDDF*

Click here to download the sequence:
Link to NCBI Protein BLAST