Transcript Information: S_Transcript_85200.p1


Annotated TAIR IDAT4G34660.1
Annotated Gene NameSH3 domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:16545595-16548294 | Reverse length=368
E-Value9.4E-216
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.941817637143
Replicate 218.494683429615
Replicate 315.808059500229
Condition 2: 8 Hour
Replicate 119.543484387669
Replicate 216.522605194839
Replicate 317.293989566306
Condition 3: 24 Hour
Replicate 116.368942346052
Replicate 216.799321249314
Replicate 317.131954690267


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85200.p1 GENE.S_Transcript_85200~~S_Transcript_85200.p1 ORF type:complete len:371 (+),score=95.88,SH3_9|PF14604.2|3.9e-13,SH3_1|PF00018.24|6.2e-09,SH3_2|PF07653.13|5.3e-07 S_Transcript_85200:243-1355(+)
ATGGAAGCCATTAGGAAACAAGCTACCAGGCTTCGCGAACAAGTCGCCAAGCAACAACAGGCTGTCCTCAAGCAATTTGGTGCAGGAGGATATAGTTCAGATAATGTAATCACAGATGAGGCAGAGCTTCATCAGCATCAGAAACTTGAGAAGCTTTTCATATCAACGCGGGCTGCTAAGCATTTTCAAAGAGATATTGTTCGTGGAGTTGAAGGTTATATTGTTAATGGATCAAAACAAGTTGAAATTGGAACGAAGTTATCCGAAGACAGCAGAAAATATGGTGGTGAAAATACATGTACTAGTGGTAGCACGCTATCCAAGGCAGCCCTAAGCTTTTCTAGAGCCCGTGCACAGATGGAAAAGGAACGTGGAAATTTGTTGAAGGCTTTGGGCACACAGGTAGCAGAACCCTTAAGAGCGATGGTTATGGGAGCTCCCTTGGAGGATGCTCGGCATCTTACTCAACGCTATGACAGGATGCGGCAAGAGGCCGAAGCTCAGGCCATTGAAGTATCCAGGCGCCAAGCAAAAGTTAGGGAGTCACAAGGAAATCCAGATCTTGTTTTGAAACTAGAAGCTGCAGAGTCAAAGCTTCAGGATCTGAAATCAAACATGGGGATATTAGGGAAGGAAGCCGCAGCTGCAATGGCTGCTGTTGAAGCTCAACAACAGAGGTTGACTCTTCAGCGGCTCATTGCCATGGTGGAAGCAGAACGTGCCTACCATCAAAGAGCACTCCAGATACTAGAGCAGCTTGAAGGCGAGATGATCTCCGAGCGACAACGGATAGAGGCTCCTCCTAGCCCTACTGTTGACAACAATGCACCACCACCTCCAGCATATGAAGAAGCCAATGGGGTATTTGCATCCCAGACTCAGAACGGTGCAACAGACAGCATGGGTTACTTCCTTGGAGAGGTTATGTGCCCCTATCAAGCTGAATCTGATACTGAACTCAGTTTATCAATGGGTGATTATGTTGTTGTACGGAAGGTATCCAACAATGGCTGGGCTGAAGGTGAATGCAAAGGCAGAGCTGGTTGGTTCCCCTATGGATACATCGAGAGACGAGACCGTGTTTTAGCGAGCAAGATCGCAGAAGTATTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85200.p1 GENE.S_Transcript_85200~~S_Transcript_85200.p1 ORF type:complete len:371 (+),score=95.88,SH3_9|PF14604.2|3.9e-13,SH3_1|PF00018.24|6.2e-09,SH3_2|PF07653.13|5.3e-07 S_Transcript_85200:243-1355(+)
MEAIRKQATRLREQVAKQQQAVLKQFGAGGYSSDNVITDEAELHQHQKLEKLFISTRAAKHFQRDIVRGVEGYIVNGSKQVEIGTKLSEDSRKYGGENTCTSGSTLSKAALSFSRARAQMEKERGNLLKALGTQVAEPLRAMVMGAPLEDARHLTQRYDRMRQEAEAQAIEVSRRQAKVRESQGNPDLVLKLEAAESKLQDLKSNMGILGKEAAAAMAAVEAQQQRLTLQRLIAMVEAERAYHQRALQILEQLEGEMISERQRIEAPPSPTVDNNAPPPPAYEEANGVFASQTQNGATDSMGYFLGEVMCPYQAESDTELSLSMGDYVVVRKVSNNGWAEGECKGRAGWFPYGYIERRDRVLASKIAEVF*

Click here to download the sequence:
Link to NCBI Protein BLAST