Transcript Information: S_Transcript_85261.p1


Annotated TAIR IDAT1G02170.1
Annotated Gene Namemetacaspase 1
Annotated Gene Symbol(s)LOL3, ATMCPB1, MCP1B, ATMC1, MC1
Annotation TypeOrtholog
Chromosome Positionchr1:411883-413426 | Forward length=367
E-Value2.9E-192
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.175944023497
Replicate 228.934805977069
Replicate 330.435553536871
Condition 2: 8 Hour
Replicate 143.932634697044
Replicate 235.024779427769
Replicate 336.283532945091
Condition 3: 24 Hour
Replicate 128.469971106594
Replicate 222.230350699204
Replicate 326.117909370325


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85261.p1 GENE.S_Transcript_85261~~S_Transcript_85261.p1 ORF type:complete len:366 (+),score=63.54,Peptidase_C14|PF00656.18|7e-64,zf-LSD1|PF06943.8|9.8e-11 S_Transcript_85261:227-1324(+)
ATGCTATTAGTGGACTGCTCAAACTGCAAGACCCCATTACAGCTCCCTCCTGGAGCCACCTCTATCCGCTGTGCCATCTGTCGTGCCGTCACTAGTATTGCCGATCCTCGCTCTGCCCCTCCTCCACCTTTCTCTTATTACCCTCCACCACCCCCACCACCCCACCACCACCACCCACCTCCGCCTTATTATGCTGGAGCCCCGTCTCGACAACCACCACCCCCACCGCCACATACCGCCCGTAAGAAGGCTGTGATTTGTGGGATCTCTTACAAGAACACCAGGTTTGAACTTAAGGGTTGTATCAATGATGCCAAGTGTATGAAATTCTTGCTTATCAATAAGTTCCATTTTCCTGAATCAGAGATTCTCATGCTTACTGAAGAAGAGCGTGATCCTTACAGAATTCCCACCAAGCACAATATCAGAATGGCAATGGCTTGGCTCGTAGCAGGATGTAGAGCAGGGGATTCCTTAGTGTTTCACTACTCAGGACACGGTTCACAACAAAGAGACTACAGTGGAGAAGAAGCAGATGGCTTTGATGAAACCCTCTGCCCCTTGGACTTTCAAACAAACGGAATGATAGTAGATGATGAGATTAACGACACTATTGTTAAGCCCCTCCCCCCTGGTGTTAAGCTTCATGCAATCATAGACGCTTGCCATAGTGGAACTGTGTTGGACCTGCCGTTTCTTTGCAGAATGAACAGGAGTGGACAGTATGTGTGGGAGGATCATCGCCCTAGATCTGGTCGATGGAAAGGTACTAGCGGTGGCGAGGTAATTTCCTTTAGTGGCTGTGATGATGATCAAACATCTGCTGATACATCGGCTCTATCAAAGGTGACTTCAACTGGTGCAATGACTTATTGTTTTATCCAAGCAGTCGAGCGAGGACAAGCAACTACTTATGGAAGCATGCTCAATGCTATGCGTGCAGCCATTCGCAATACTGAGCCTCAACTTGGGGGTGGTGTCATGACATCTCTCGTTACCATGCTTTTGACTGGAGGAAGTGGTGTCGGGTTGAGACAGGAACCGCAGTTGACTGCAAACGAACCATTTGATGTTTATGCAAAGCCTTTTTCTCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85261.p1 GENE.S_Transcript_85261~~S_Transcript_85261.p1 ORF type:complete len:366 (+),score=63.54,Peptidase_C14|PF00656.18|7e-64,zf-LSD1|PF06943.8|9.8e-11 S_Transcript_85261:227-1324(+)
MLLVDCSNCKTPLQLPPGATSIRCAICRAVTSIADPRSAPPPPFSYYPPPPPPPHHHHPPPPYYAGAPSRQPPPPPPHTARKKAVICGISYKNTRFELKGCINDAKCMKFLLINKFHFPESEILMLTEEERDPYRIPTKHNIRMAMAWLVAGCRAGDSLVFHYSGHGSQQRDYSGEEADGFDETLCPLDFQTNGMIVDDEINDTIVKPLPPGVKLHAIIDACHSGTVLDLPFLCRMNRSGQYVWEDHRPRSGRWKGTSGGEVISFSGCDDDQTSADTSALSKVTSTGAMTYCFIQAVERGQATTYGSMLNAMRAAIRNTEPQLGGGVMTSLVTMLLTGGSGVGLRQEPQLTANEPFDVYAKPFSL*

Click here to download the sequence:
Link to NCBI Protein BLAST