Transcript Information: S_Transcript_85278.p1


Annotated TAIR IDAT1G76940.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28902707-28904085 | Reverse length=233
E-Value2.1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0394734017685
Replicate 25.1217190044231
Replicate 33.7873475885965
Condition 2: 8 Hour
Replicate 15.9025633913493
Replicate 25.7927108085006
Replicate 35.1386418333437
Condition 3: 24 Hour
Replicate 14.8760900648648
Replicate 24.2494646705651
Replicate 36.305511101279


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85278.p1 GENE.S_Transcript_85278~~S_Transcript_85278.p1 ORF type:5prime_partial len:112 (+),score=12.67 S_Transcript_85278:2-337(+)
AAGGATTCAAGACATGCGGGTGGAGATCCACTTGTGCTATGCTTTGTTGACTTTGTGAGTCCGCCGCATGCTGCAACGGCGATGGATGCCTTACAAGGTGATGTCATGCTGGTTTTCTTGCTCGTATACAACCTTGTACTTACATCAGCTCATTCATATTATTTGTGTTTTTTCCTTACAAGTTGCCATTCTTTGTCTGGAACAAATTGTGGAGACACAATGTTTCAGTGCAATTTTATGCATGTTATGGTTGTCTCTTCTTTCTTCACTCCGCAATTGGCTTGTTTATGTGCTGAGCTATCATTCTATGACCTAAAAGGAGGAACATGGTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85278.p1 GENE.S_Transcript_85278~~S_Transcript_85278.p1 ORF type:5prime_partial len:112 (+),score=12.67 S_Transcript_85278:2-337(+)
KDSRHAGGDPLVLCFVDFVSPPHAATAMDALQGDVMLVFLLVYNLVLTSAHSYYLCFFLTSCHSLSGTNCGDTMFQCNFMHVMVVSSFFTPQLACLCAELSFYDLKGGTWF*

Click here to download the sequence:
Link to NCBI Protein BLAST