Transcript Information: S_Transcript_85288.p1


Annotated TAIR IDAT5G49610.1
Annotated Gene NameF-box family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20131448-20132527 | Reverse length=359
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8536418770773
Replicate 22.853893176594
Replicate 33.5325638767096
Condition 2: 8 Hour
Replicate 16.3657881543681
Replicate 25.954696030972
Replicate 35.9917681078679
Condition 3: 24 Hour
Replicate 13.9125164460766
Replicate 23.0443925998079
Replicate 33.5135186235983


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85288.p1 GENE.S_Transcript_85288~~S_Transcript_85288.p1 ORF type:complete len:402 (+),score=54.47,F-box|PF00646.29|1.3e-07,F-box-like|PF12937.3|5.3e-06 S_Transcript_85288:162-1367(+)
ATGGGAGAGATGATGCTGAAAAGACATAAATTAGTTTATCCTGAAGAATGTGTGTATGAAGTATTGGCAAGGCTCCCATTGAAGACCTTGATGAGATGCAAGTGCGTATGCAAATCATGGTATGACGTGATATCTAGCAATTGGTTTGTTAGGCTCCACTCTGGTATTCACCACCAAGCACCATCATCTTCTTCTTATGCAAGTAACAGTATATTGATGAGTGTTGAATATGGATTCACTCGTCTTGCTTTTTCTTTTATATCTTACTCTTATATGGCTGAATTTTTATTAACTTCTGCTCCTTTTATTAAGTTAGGATTAACACTTACAAAAACAACCCAGGAAAATGAGGAGAGGAGGAATCACATTGCTTCTCATTCCCATTCCCATTGTTTGATATATGCTGCTGATTGTATTGCTTTATGGAAACCCACCACCACCACCACCGCCACTGCCACAACAACAACCCCTGACGAGTTTACTCTTCTCCCACCTGTAAGACTAGAATTTGAGCTTCCTAAACCAGATCTTTGGTTTGGACTAGTGGGTAATACTAATGATTGTGATTACAAGGTGGTGATGTTTGGGTATTACTTAAAGAGGCGTAGTATTTTTGCTACTGCTGAACTGGAAGAAGAGCCTCCTAAAATATACTGCTCTAAGACTAGCTCATGGGAAACCATCATAGGGTCTAACCCACAAGCTTGGCCTTTGTCCCTGCCTGAGCCAGAATATGCATCAATATGTATTGATGGGTCTCCTTGGTGGTTAACTGTCAAGAGGGATGCTTTTGACCGCCAGCTTGAGTTTGGTACTACTTGTGGATTTGACTCCATCATGTCCTTCCATAACAATGATCTTGGCTTTAAGTTATATGACATCCCACAAGCTTATCTTGGACTCCCAGTTGCTAATTTTAGCTTATTTTCCTTCAAGGGATGTCCTGCTTTGGCCTTTTGTTATGAATCCTGCTTCCAAGTGTGGGTAATGATCACACATGTGTCTTGGACTAAGATCTGCTCTTCTGTTCCCGTTCCTCGAGTTGACCGGGTTGTTGGCTATTGGAACACCCCTCATTTTATTCTTCTCCAAGGTAATATGTCCTCGGATATGCTCATTTTACATAATACCTGCACTAATAATTTCAAGCATCTTCAGCTCAAGAGGATCCGGCCTGTTTATGCGTCTAATTTCTATTTGTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85288.p1 GENE.S_Transcript_85288~~S_Transcript_85288.p1 ORF type:complete len:402 (+),score=54.47,F-box|PF00646.29|1.3e-07,F-box-like|PF12937.3|5.3e-06 S_Transcript_85288:162-1367(+)
MGEMMLKRHKLVYPEECVYEVLARLPLKTLMRCKCVCKSWYDVISSNWFVRLHSGIHHQAPSSSSYASNSILMSVEYGFTRLAFSFISYSYMAEFLLTSAPFIKLGLTLTKTTQENEERRNHIASHSHSHCLIYAADCIALWKPTTTTTATATTTTPDEFTLLPPVRLEFELPKPDLWFGLVGNTNDCDYKVVMFGYYLKRRSIFATAELEEEPPKIYCSKTSSWETIIGSNPQAWPLSLPEPEYASICIDGSPWWLTVKRDAFDRQLEFGTTCGFDSIMSFHNNDLGFKLYDIPQAYLGLPVANFSLFSFKGCPALAFCYESCFQVWVMITHVSWTKICSSVPVPRVDRVVGYWNTPHFILLQGNMSSDMLILHNTCTNNFKHLQLKRIRPVYASNFYLF*

Click here to download the sequence:
Link to NCBI Protein BLAST