Transcript Information: S_Transcript_8536.p1


Annotated TAIR IDAT1G65020.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast hits to 69 proteins in 27 species: Archae - 0; Bacteria - 18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:24154523-24156511 | Reverse length=319
E-Value8.5E-145
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.021545820894
Replicate 216.666627405677
Replicate 317.472065763411
Condition 2: 8 Hour
Replicate 124.890625850028
Replicate 220.016917203966
Replicate 323.7576010458
Condition 3: 24 Hour
Replicate 119.410159634057
Replicate 222.172645381194
Replicate 317.569535576319


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_8536.p1 GENE.S_Transcript_8536~~S_Transcript_8536.p1 ORF type:complete len:323 (+),score=48.69,NERD|PF08378.7|1.7e-09,NERD|PF08378.7|2e+03 S_Transcript_8536:296-1264(+)
ATGTGGATAGAGCTGCTGTGTGGTCTTGTTCTGTATAAAGTACTCCGTGTCTTCTTCGGCGACGATGACGTTTTAGATGTCGAAACCTCCGACTTTAACGCCCTCTTCTCCGTCGCTGCGAGATTGGAGAAGCTGTACGGGGGTAAGGTCTATGTCGGACTTCTACTCCCCGATGCCGATTCTGGCTCTCGCCAAAATATCGATTTGGTTCTCGTCACTAAAGAGGAGGTTGTGGTGATTTGTGTCAAAAACGTGGCTGGGTTTGTTTCAATTAACTCTGATAGAAGTTGGCTTTGTATCAGTGATCACAAACATAAGGAGGAACATCATCCAGATCCTGTAGCAGAAGCCCGATGTCAAGCTGCTGTTTTAGAAGCATATCTTGAACAAAGAGGAGTTGCTCTTCCGGAAGGATATTTATCTTACAAAGTTATAACTTCCAACCCGAAGTTTCGATCACTAAATCCAGATCACTTCCCACCAGAAGTTATACAATATGATCAGTGGGTGCAGATAAAACCAGAATCAAAAAGCATGCTTTCTGGATGGATCAAAGGGGCCTTTCGCACTGTAAAGAAAGATATGCAGGATTCTATACAGCAACAGCTTCATTTTGTTCTTAGTACAGCTCCAATGTGGGATAGGCTGGAGCTCAAAGGCAGCAAATTTGTTCTAGGAGAATTCATGGAGTTTAAAGGAAAGCACGATGATGTGCAAGCTGTACAACATATTAAAAGATCCAAAGTTGGTCGGATTATTATCAAGAAAACATCTATGTTTGGCTTAGCTCCAACAAAACTTCAAGTTTTGTATTCTCCTCGTGATTATCGGAGTGAAGGAGCTTCTGCTTCTGATTGGAAGGAGGTGACTGTCAGGTCAAGTACGGAGGTTATCTTTCATCCGCAAAATTCCAAGAAAGTTCGCAAATTCAAGTTATCCACAGTTACTTCTCTTACACTGAGTGCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_8536.p1 GENE.S_Transcript_8536~~S_Transcript_8536.p1 ORF type:complete len:323 (+),score=48.69,NERD|PF08378.7|1.7e-09,NERD|PF08378.7|2e+03 S_Transcript_8536:296-1264(+)
MWIELLCGLVLYKVLRVFFGDDDVLDVETSDFNALFSVAARLEKLYGGKVYVGLLLPDADSGSRQNIDLVLVTKEEVVVICVKNVAGFVSINSDRSWLCISDHKHKEEHHPDPVAEARCQAAVLEAYLEQRGVALPEGYLSYKVITSNPKFRSLNPDHFPPEVIQYDQWVQIKPESKSMLSGWIKGAFRTVKKDMQDSIQQQLHFVLSTAPMWDRLELKGSKFVLGEFMEFKGKHDDVQAVQHIKRSKVGRIIIKKTSMFGLAPTKLQVLYSPRDYRSEGASASDWKEVTVRSSTEVIFHPQNSKKVRKFKLSTVTSLTLSA*

Click here to download the sequence:
Link to NCBI Protein BLAST