Transcript Information: S_Transcript_85383.p1


Annotated TAIR IDAT4G14190.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:8183594-8185180 | Reverse length=501
E-Value1E-149
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.7327547374374
Replicate 210.758236431855
Replicate 312.295157389067
Condition 2: 8 Hour
Replicate 112.957713354601
Replicate 211.59074824763
Replicate 310.962435911133
Condition 3: 24 Hour
Replicate 112.441181264167
Replicate 29.8425695988709
Replicate 310.713363623507


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85383.p1 GENE.S_Transcript_85383~~S_Transcript_85383.p1 ORF type:complete len:525 (+),score=98.95,PPR_2|PF13041.2|0.099,PPR_2|PF13041.2|2.3e-10,PPR_2|PF13041.2|9.4e-05,PPR_2|PF13041.2|5.4e+02,PPR_2|PF13041.2|4.4e+03,PPR_2|PF13041.2|7.2,PPR_2|PF13041.2|1.6e+04,PPR|PF01535.16|0.23,PPR|PF01535.16|4.4e-07,PPR|PF01535.16|0.04,PPR|PF01535.16|1.1,PPR|PF01535.16|7.3,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|0.00034,PPR_1|PF12854.3|4.9,PPR_1|PF12854.3|0.025,PPR_1|PF12854.3|15,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|0.68,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|90,PPR_3|PF13812.2|4.8e+03 S_Transcript_85383:229-1803(+)
ATGGAGATTCAAACCTCACTGAGGAGCATCTACACAAACACCACCTTACCATCCAAACCCAAATCTACGACCTATAGCAAACCCCATTTCAGAAAGCCCTTCAAAGTCCCTGAATTTTCCCTCCATTCAAACTCCCACCTCACTAACTCTTCTCCTTCCCTGTCATTACCATCTCATCCTTCTCACAACTATCAATCAAACCCACCTCGTAAATCCGTCAAGCAAACTACCCTCTTTGTTGAAAAGTACCATGAAACTCAAAATCTCTTATCCTTGATTGGAAAGCTCAAAAGTGAAAATTTGAGCCCTTTGCAGGTGCTGGAGGAAGATGGTGACTGGAACAAAACCCAGTTCTGGGCTGTCATTAAATTCCTTCAAGAAAGTTCCAGACTTGAGGAGATTCCTAAGGTCTTTGATGCATGGACAAAGCTGGAGCAATCAAGGATTAATGAATTTAACTGTACCAAGATTATAGGCTTGTTAAGTGAAGCAGGTATGATGGATGAAGCCACATCAAAACTTCAAGATATGAAGAGATATGGTTTAGAACTTAGTTCAGATGTCTTCAATTCTATAATCCATTGTTATGCTCAGAAAGGCAAGTTTGATGAGGCTCTTTGTTACCTTAATGAGATGAAGGAAATGAAATTGTGCCCAGATACCGAAACCTATGATGGGTTGATTAAAGCTTATGGGAAGTTCCAAATGTATGATGAGATGATCAACTGTTTAAAGATGATGGAATGTGGTGGATGTGCGCCTGATCACATTACATATAACCTATTGATCTGTGAACTCTCAAAGGGGGGTTTGCTGAGCAGAATGGAGAGGATGTACCAAACTCTTCTTTCGAAGAAAATGAATCTTCAATCATCTGCTTTGGTTACAATGATTGAGGCGTATGCCAACTTTGGGGTGTGGGAGAAGATGGAAGAGTTTTATATGAAAGTTGCAAACTCAAGGACCTTCCTCAAGGAAGGACTGATAAGGAAGATTGCTAGAGTTTACATTGAAAATCACATGTTCTCCAAGTTAAATGATTTGGGGAATGATGTTGCTCAAAAAAATGGTAGGACTAACCTCTTTTGGCGACTACGCCTCCTTTCTTGTGCCTGTCTTCTGAATAAGAAGGGCATGAATTCTGTCATTCAAGAGATGGAGAAAGTCAAGGTTTCATGGAATGTAACTATTGCTAACATTGTCTCACTGGCTTACCTGAATATGAAAGACTTTAAGCAGTTAAGTCTGGGACTCTCAGAACTGGCAAATAGACATGTCAAGCCTGATATTGTCACTTTTGGGATCTTATATGATGCACATAATGTTGGCTTTGATTGGAGGAGCACATTAAAGACATGGAGGAAACATGGTTATCTTGAGAATGGTGTGGAAATGACTACTGATCCCTTGGTTTTCACTGCATTCGGGAAAGGACTTTTTCTTATAACTATAGAGGAAATGTACTCTTTACTTGAGCCTAAAACCAGAGAGGAGAAAAGATGGACTTATGATAGCCTACTTGATCTAGTCTTAAAGCACCATGGAAATTTGCCTTTTCCAGATGGAAATGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85383.p1 GENE.S_Transcript_85383~~S_Transcript_85383.p1 ORF type:complete len:525 (+),score=98.95,PPR_2|PF13041.2|0.099,PPR_2|PF13041.2|2.3e-10,PPR_2|PF13041.2|9.4e-05,PPR_2|PF13041.2|5.4e+02,PPR_2|PF13041.2|4.4e+03,PPR_2|PF13041.2|7.2,PPR_2|PF13041.2|1.6e+04,PPR|PF01535.16|0.23,PPR|PF01535.16|4.4e-07,PPR|PF01535.16|0.04,PPR|PF01535.16|1.1,PPR|PF01535.16|7.3,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|0.00034,PPR_1|PF12854.3|4.9,PPR_1|PF12854.3|0.025,PPR_1|PF12854.3|15,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|0.68,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|90,PPR_3|PF13812.2|4.8e+03 S_Transcript_85383:229-1803(+)
MEIQTSLRSIYTNTTLPSKPKSTTYSKPHFRKPFKVPEFSLHSNSHLTNSSPSLSLPSHPSHNYQSNPPRKSVKQTTLFVEKYHETQNLLSLIGKLKSENLSPLQVLEEDGDWNKTQFWAVIKFLQESSRLEEIPKVFDAWTKLEQSRINEFNCTKIIGLLSEAGMMDEATSKLQDMKRYGLELSSDVFNSIIHCYAQKGKFDEALCYLNEMKEMKLCPDTETYDGLIKAYGKFQMYDEMINCLKMMECGGCAPDHITYNLLICELSKGGLLSRMERMYQTLLSKKMNLQSSALVTMIEAYANFGVWEKMEEFYMKVANSRTFLKEGLIRKIARVYIENHMFSKLNDLGNDVAQKNGRTNLFWRLRLLSCACLLNKKGMNSVIQEMEKVKVSWNVTIANIVSLAYLNMKDFKQLSLGLSELANRHVKPDIVTFGILYDAHNVGFDWRSTLKTWRKHGYLENGVEMTTDPLVFTAFGKGLFLITIEEMYSLLEPKTREEKRWTYDSLLDLVLKHHGNLPFPDGNA*

Click here to download the sequence:
Link to NCBI Protein BLAST