Transcript Information: S_Transcript_8539.p1


Annotated TAIR IDAT1G65020.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast hits to 69 proteins in 27 species: Archae - 0; Bacteria - 18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:24154523-24156511 | Reverse length=319
E-Value5.5E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.395210621708
Replicate 214.708526371677
Replicate 317.090268770803
Condition 2: 8 Hour
Replicate 116.918142984925
Replicate 225.056470476494
Replicate 317.336889385385
Condition 3: 24 Hour
Replicate 122.208964882104
Replicate 212.087366174052
Replicate 317.823578046282


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_8539.p1 GENE.S_Transcript_8539~~S_Transcript_8539.p1 ORF type:complete len:300 (+),score=33.71,NERD|PF08378.7|1.4e-09,NERD|PF08378.7|1.8e+03 S_Transcript_8539:298-1197(+)
ATGTGGATAGAGCTGCTGTGTGGTCTTGTTCTGTATAAAGTACTCCGTGTCTTCTTCGGCGACGATGACGTTTTAGATGTCGAAACCTCCGACTTTAACGCCCTCTTCTCCGTCGCTGCGAGATTGGAGAAGCTGTACGGGGGTAAGGTCTATGTCGGACTTCTACTCCCCGATGCCGATTCTGGCTCTCGCCAAAATATCGATTTGGTTCTCGTCACTAAAGAGGAGGTTGTGGTGATTTGTGTCAAAAACGTGGCTGGGTTTGTTTCAATTAACTCTGATAGAAGTTGGCTTTGTATCAGTGATCACAAACATAAGGAGGAACATCATCCAGATCCTGTAGCAGAAGCCCGATGTCAAGCTGCTGTTTTAGAAGCATATCTTGAACAAAGAGGAGTTGCTCTTCCGGAAGGATATTTATCTTACAAAGTTATAACTTCCAACCCGAAGTTTCGATCACTAAATCCAGATCACTTCCCACCAGAAGTTATACAATATGATCAGTGGGTGCAGATAAAACCAGAATCAAAAAGCATGCTTTCTGGATGGATCAAAGGGGCCTTTCGCACTGTAAAGAAAGATATGCAGGATTCTATACAGCAACAGCTTCATTTTGTTCTTAGTACAGCTCCAATGTGGGATAGGCTGGAGCTCAAAGGCAGCAAATTTGTTCTAGGAGAATTCATGGAGTTTAAAGGAAAGCACGATGATGTGCAAGCTTTACAACATATTAAAAGATCCAAAATTGGTCGGATGATTATCAAGAAAACATCTATGTTTGGCTTAGGTAACCTCTCTACGCTTTTCTGCCCCCATTTTTGCCTGAATTTTCTTTTTTTGTTTTGTTTTATCTTTTTAGAAAATGATAGATCTTATAGAAAGAAGCTATGTTACTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_8539.p1 GENE.S_Transcript_8539~~S_Transcript_8539.p1 ORF type:complete len:300 (+),score=33.71,NERD|PF08378.7|1.4e-09,NERD|PF08378.7|1.8e+03 S_Transcript_8539:298-1197(+)
MWIELLCGLVLYKVLRVFFGDDDVLDVETSDFNALFSVAARLEKLYGGKVYVGLLLPDADSGSRQNIDLVLVTKEEVVVICVKNVAGFVSINSDRSWLCISDHKHKEEHHPDPVAEARCQAAVLEAYLEQRGVALPEGYLSYKVITSNPKFRSLNPDHFPPEVIQYDQWVQIKPESKSMLSGWIKGAFRTVKKDMQDSIQQQLHFVLSTAPMWDRLELKGSKFVLGEFMEFKGKHDDVQALQHIKRSKIGRMIIKKTSMFGLGNLSTLFCPHFCLNFLFLFCFIFLENDRSYRKKLCYS*

Click here to download the sequence:
Link to NCBI Protein BLAST