Transcript Information: S_Transcript_85406.p1


Annotated TAIR IDAT5G48520.1
Annotated Gene Nameunknown protein; Has 609 Blast hits to 593 proteins in 129 species: Archae - 0; Bacteria - 41; Metazoa - 390; Fungi - 40; Plants - 64; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19661407-19666147 | Forward length=617
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.077212878202
Replicate 212.22929340141
Replicate 311.149336400621
Condition 2: 8 Hour
Replicate 113.168514928408
Replicate 212.509380519782
Replicate 312.644408789989
Condition 3: 24 Hour
Replicate 112.07310416579
Replicate 211.791059183156
Replicate 310.751049722116


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85406.p1 GENE.S_Transcript_85406~~S_Transcript_85406.p1 ORF type:complete len:617 (+),score=123.53,HAUS-augmin3|PF14932.2|1.5e-76,HAUS-augmin3|PF14932.2|1.8e+03,HAUS-augmin3|PF14932.2|1.5e+03 S_Transcript_85406:187-2037(+)
ATGAGCGGGGGAAGACTGTGTGCGTTACTGGGTGAGCTGGGGTACGAGGGGCATGAGAAGCTAGACCCTGATAGCTTCGAATGGCCATTCCAATACGACGATGCTCGACCCATTCTTGATTGGCTCTGCTCTAGTCTCCGTCCCACCAATGTTCTCTCTCCTTCCGAGCTTTCCCAGTTTGAGCAGTTTTTACAAGAAGGCAAATTTTTGGAGGGGGAGGATTTGGATTTTGCATATGATAGTATTTCTGCCTTTTCGGTTAGGAGAGACAATCAGGAGGCAGTTTTTGGAGCTGAAGAAGGATTGAAGGAGATTAGGGATGCAACACTGGCATACAAAGCTGAAGCTTTAGAGCTGCAGAGACAGCTTAGTCAGTTGCAGTCTCAATTCGATATGCTCACTGGCCAGGCCTCAGCTCTAATCCAAGGGAAAAGGGCAAGAGTTGTGGCAACTTCTTCAGTTACAGGACAACTTAGTACAATGGAAGATAACCTTTCAGCTCGAAACTTGGAGATGAATGCAGTTCTTGGAAGGATTGCTTCAACTGCGCAGGAGTTGGCACATTATCATTCCGGAGAAGATGATGGCATATATTTGGCATACTCTGATTATCATCAATACCTGGTTAGTGATGCGGCTTGTGCAAAGGAATTAAACCAGTGGTTTGCCAAGCATCTGGATTCGGTTCCTTTTCGGTTGGTTGCTGAAGATGGAAAATCCAAATGCTCGTGGGTGAGTTTGGATGATGTGTCAAATATATTAGTAAGAGATTTGGAAAATTGTCATCGTCAACGGGTGTCTGAGCTGCAAAGGTTACGCTCCATATTTGGGACAAGCGAGAGGCAATGGGTTGAGGCCCAAGTTGAAAATGCTAAACAGCAAGCAATTCTTGCGGCAATTAAAACTCAAGTTGCCTCTGATGAAGCTCACATTCATATGGATCTACATTCTCTCAGGAGAAAGCATGCAGAGTTGGTTGGAGAACTTTCAAATCTTCACCACAAAGAAGAGAAGTTGTTATCTGAGACTATTCCTGATCTTTGTTGGGAGTTGGCTCAGCTTCAAGACACATATATTTTGCAAGGTGATTATGATCTGAAAATCATGCGCCAAGAATTCTATATTAACCGACAAAAGGCGTTCATTAATCATTTAATAAACCAGCTTGCAAGGCACCAGTTTCTAAGGATAGCATGTCAGTTGGAAAAGAAAACTACGCTGGGAGCATATTCACTTATGAAAGTTGTTGAGTCAGAACTTCAGTCATACCTTTCTGCTACAAAAGGACGAGTGGGCCATTGCCTTGGCTTGATTCAAGCAGCATCTGATGTGCAAGAACAAGGGGCTGTGGATGACAGGGACAATTTATTGCATGGTGTTAGAGACCTTTTGAGAATCTATTCAAATGCCCAGGCTGGTCTCTCAACGTATGTTTCAGCACCAGGCATTATTCAGCAGATATCAAGTCTTCAGTCAGACTTAATGACTCTTCAGTCTGATCTAGAAAGTCTGCTTCCTGAGGACAGAAACAGATGCATCAATGATCTGTGTACGCTAATACAGAGTTTGCAGCAGCTGCTATTTGCCTCATCAACAACAGCACAGCCCGTACTGACACCAAGGCCATTGATGAAAGAGCTCGATGAAATGGAAAAGATCAACGCAAAACTCTCCACTGCTGTCGAAGAAGTTACACTCGAGCATTATAAAAAGAATGAGATCGTCAAACATCACGCAACAGAGGTAGGGTTCCAAAGGCGTGTTTTTGTTGATTTCTTCTGTAATCCCGATCGTCTGAGGAGTCAAGTAAGAGAGCTGACTGCTCGAGTCAGAGCTTTACAAGCTTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85406.p1 GENE.S_Transcript_85406~~S_Transcript_85406.p1 ORF type:complete len:617 (+),score=123.53,HAUS-augmin3|PF14932.2|1.5e-76,HAUS-augmin3|PF14932.2|1.8e+03,HAUS-augmin3|PF14932.2|1.5e+03 S_Transcript_85406:187-2037(+)
MSGGRLCALLGELGYEGHEKLDPDSFEWPFQYDDARPILDWLCSSLRPTNVLSPSELSQFEQFLQEGKFLEGEDLDFAYDSISAFSVRRDNQEAVFGAEEGLKEIRDATLAYKAEALELQRQLSQLQSQFDMLTGQASALIQGKRARVVATSSVTGQLSTMEDNLSARNLEMNAVLGRIASTAQELAHYHSGEDDGIYLAYSDYHQYLVSDAACAKELNQWFAKHLDSVPFRLVAEDGKSKCSWVSLDDVSNILVRDLENCHRQRVSELQRLRSIFGTSERQWVEAQVENAKQQAILAAIKTQVASDEAHIHMDLHSLRRKHAELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYILQGDYDLKIMRQEFYINRQKAFINHLINQLARHQFLRIACQLEKKTTLGAYSLMKVVESELQSYLSATKGRVGHCLGLIQAASDVQEQGAVDDRDNLLHGVRDLLRIYSNAQAGLSTYVSAPGIIQQISSLQSDLMTLQSDLESLLPEDRNRCINDLCTLIQSLQQLLFASSTTAQPVLTPRPLMKELDEMEKINAKLSTAVEEVTLEHYKKNEIVKHHATEVGFQRRVFVDFFCNPDRLRSQVRELTARVRALQAS*

Click here to download the sequence:
Link to NCBI Protein BLAST