Transcript Information: S_Transcript_85429.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value2E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.683134252237
Replicate 28.4418654879693
Replicate 36.8835564255692
Condition 2: 8 Hour
Replicate 19.0607879046973
Replicate 29.4003777148147
Replicate 38.5063241616123
Condition 3: 24 Hour
Replicate 110.87116267607
Replicate 29.8422655906673
Replicate 311.130855277375


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85429.p1 GENE.S_Transcript_85429~~S_Transcript_85429.p1 ORF type:complete len:426 (+),score=68.76,RVT_1|PF00078.23|1.5e-31 S_Transcript_85429:344-1621(+)
ATGGTGATGTCTCAGATGATTGGAAGGGAACAAGCGGCTTTCGTAAAAGGTAGATTGTTGTATGAAAATATGCTGCTTGCTCATGAGTTATCACAGCATTATAATAGAGCTCACATTTCTCCTCGAGTTCTCATGCAACTTGATATTCAAAAAGCGTATGATACTGTTAGATGGGATTTTATTAAATCTGCCCTGGATTCTTTTGGGTTCCCTGGTGCCTTCAGTTCGAAAATTTTAGCTTGCATCACTTCCTCTAGATTTTCTATCAGCATTGATGGATGGCATAAGGGCTACTTTGAGGGTAAGTGTGGGTTGAGGCAAAGTGATCCTCTCTCCCCTTATTTTTTTGTTATTTGCATAGAGGCATTATCCAGGATGCTCAGGAAACTTGGACGTTGTAAGGAGTTCTCCTACCACCCCAAATGGTTGGGTATCACCTATCTTGCCTTTGATGATGACCTGTCGATTTTCACAAGGGGTGATATTCCTTCTATTAAAGCTGCAATTGACTGTGTAGGGAAGTTTTTGGATATGTCAGGGCTTTACATCAATTCTCAGAAGACTAGCATATTTTTTGGTGGTGTTAAGCAGCAGATTAAGGAGGCGATTCTCAAGAATACTGGTTTTGGAGAGGGGAGATTACCAGTAAGGTATCTAGGCCTACCCTTAAGCTCAGCTGGCATTAAAGCTCATATGTGCAGGGAGTTAATAAATAAAAGTCAGCTGAAACTAAGCCATTGGTCTGCTCAATCTTTACCTTATGCTAGCAAGATGGAATTGATCAATTCTGTGCTATTTGGGATTGAGACTTTTTGGTGCAGTGTTTTTCTCCTTCCCAAAGGTGTTATTGAGAAAATTGAACAACTGTGTAGGAATTTTGTTTGGGGTGTACCTGAGAATGGGAGAAGGATGATTTTCTTTGCATGGCAAAAAGTGTGTCGAGATAAGCATGGGGGCTTTCATATCAGGGAGATACTGAGTTGGAATAAAAGCTTACTCATTAGATGGCTAGCAAAGCTTGCTGGTCATAGTGATTCTTTGTGTGCTGAGTGGTGTGGCAGATATTATCTGAAAGGTGATACAATCTGGATAATTAAAGCTAAGGAGATGGATTCCTGGGCCTGGAAATGTCTGCTGAAGGTTAGGGAAGATCTGAACCAGCTGGCAGGTGACTTACAACAAGCAGTTAGGCTGATCATGGAATGGGAAGCTAGTAACACCTCCTTAACCAAATGTGCCTATCTCAAGATCAGGGGTGAAGCTAGGAAGTTGAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85429.p1 GENE.S_Transcript_85429~~S_Transcript_85429.p1 ORF type:complete len:426 (+),score=68.76,RVT_1|PF00078.23|1.5e-31 S_Transcript_85429:344-1621(+)
MVMSQMIGREQAAFVKGRLLYENMLLAHELSQHYNRAHISPRVLMQLDIQKAYDTVRWDFIKSALDSFGFPGAFSSKILACITSSRFSISIDGWHKGYFEGKCGLRQSDPLSPYFFVICIEALSRMLRKLGRCKEFSYHPKWLGITYLAFDDDLSIFTRGDIPSIKAAIDCVGKFLDMSGLYINSQKTSIFFGGVKQQIKEAILKNTGFGEGRLPVRYLGLPLSSAGIKAHMCRELINKSQLKLSHWSAQSLPYASKMELINSVLFGIETFWCSVFLLPKGVIEKIEQLCRNFVWGVPENGRRMIFFAWQKVCRDKHGGFHIREILSWNKSLLIRWLAKLAGHSDSLCAEWCGRYYLKGDTIWIIKAKEMDSWAWKCLLKVREDLNQLAGDLQQAVRLIMEWEASNTSLTKCAYLKIRGEARKLK*

Click here to download the sequence:
Link to NCBI Protein BLAST