Transcript Information: S_Transcript_85512.p1


Annotated TAIR IDAT2G32950.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)COP1, ATCOP1, DET340, FUS1, EMB168
Annotation TypeHomolog
Chromosome Positionchr2:13978000-13983282 | Forward length=675
E-Value2E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5212316959645
Replicate 24.412557911503
Replicate 33.1061450246064
Condition 2: 8 Hour
Replicate 16.7343337843578
Replicate 26.829301163706
Replicate 34.9363015506273
Condition 3: 24 Hour
Replicate 14.0240574851095
Replicate 23.2206469082178
Replicate 33.5841852575691


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85512.p1 GENE.S_Transcript_85512~~S_Transcript_85512.p1 ORF type:5prime_partial len:190 (+),score=19.87,zf-C3HC4|PF00097.21|5.5e-09,zf-C3HC4_3|PF13920.2|7.1e-09,zf-C3HC4_2|PF13923.2|3e-08,zf-RING_2|PF13639.2|2.9e-06,zf-C3HC4_4|PF15227.2|2.1e-05,zf-C3HC4_4|PF15227.2|3.1e+02,zf-RING_5|PF14634.2|1.1e-05 S_Transcript_85512:1-570(+)
CTCCATATTACGTGGTATGTTCTTATCCTTACATTCTCTCTGAAACTCTTTCGTCTTTTCCCACTTAAACCCAACAAATCCAAACAAGCCCTTCTGTTTTTACTCTCCTTTCCATTTCCCTCCCTTTTTCTCTCTTTTCACCGAACTTCAATTAGAGATAAAGATTCAACAATGGCGGAAACTTCCATTGGAGGTGCTTTGGTACCTTCAGTGAAAGCCGACTCTTCATCGGAGCCAGCGCCGATGGTGGAGGAAGAAAATTCCGGTGCCGGAAAATCAAATTCCGGCGGCAATGACGTGGACAGCGATCTACTTTGTCCAATTTGCATGCAGGTCATCAAGGATGCTTTTCTCACGGCATGTGGTCATAGCTTTTGCTATATGTGCATTTCTACTCACCTTCGTAATAAGAGTGATTGTCCTTGCTGTAGTCGCTTTCTCTCTACTAGCTTGATCTTCCCTAATTTCGCTCTTGACAAGTTATTGAAGAAGCTGTCTGGTCGTCAATTTGCCATTCGGGCCTCATCTAGTGAATACCTTCGTCTAGCATTACAGCAGACAGGGTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85512.p1 GENE.S_Transcript_85512~~S_Transcript_85512.p1 ORF type:5prime_partial len:190 (+),score=19.87,zf-C3HC4|PF00097.21|5.5e-09,zf-C3HC4_3|PF13920.2|7.1e-09,zf-C3HC4_2|PF13923.2|3e-08,zf-RING_2|PF13639.2|2.9e-06,zf-C3HC4_4|PF15227.2|2.1e-05,zf-C3HC4_4|PF15227.2|3.1e+02,zf-RING_5|PF14634.2|1.1e-05 S_Transcript_85512:1-570(+)
LHITWYVLILTFSLKLFRLFPLKPNKSKQALLFLLSFPFPSLFLSFHRTSIRDKDSTMAETSIGGALVPSVKADSSSEPAPMVEEENSGAGKSNSGGNDVDSDLLCPICMQVIKDAFLTACGHSFCYMCISTHLRNKSDCPCCSRFLSTSLIFPNFALDKLLKKLSGRQFAIRASSSEYLRLALQQTGL*

Click here to download the sequence:
Link to NCBI Protein BLAST