Transcript Information: S_Transcript_85556.p1


Annotated TAIR IDAT5G06160.1
Annotated Gene Namesplicing factor-related
Annotated Gene Symbol(s)ATO
Annotation TypeOrtholog
Chromosome Positionchr5:1862623-1866298 | Reverse length=504
E-Value6.9E-280
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.776233990348
Replicate 240.868277507129
Replicate 341.350937793742
Condition 2: 8 Hour
Replicate 149.283480772272
Replicate 246.505260164471
Replicate 347.289291832311
Condition 3: 24 Hour
Replicate 138.185544369385
Replicate 235.021834817781
Replicate 337.833066607674


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85556.p1 GENE.S_Transcript_85556~~S_Transcript_85556.p1 ORF type:complete len:508 (+),score=119.01,DUF3449|PF11931.4|1e+03,DUF3449|PF11931.4|8.4e-76,Telomere_Sde2_2|PF13297.2|1.6e+03,Telomere_Sde2_2|PF13297.2|1.4e-26,SF3A3|PF16837.1|1.4e-25,SF3a60_bindingd|PF12108.4|1.4e-12,SF3a60_bindingd|PF12108.4|5.7e+02 S_Transcript_85556:306-1829(+)
ATGTCGTCGACGCTTCTTGAAGTAACTCGATCTTCACACGAAGAAGCAGAGAGACTTGAACGATTCATAGTCAAGGAGCTTCAGAATGAACCTACTTCTTCCAAAGACCGCCTTTTTCAGAGCCATCGTGTTCGTTTCATGATCGAACAAATCATCCTCACCACCGATAAACTCGTGGATATTTATGAAGATAAAGACGGTGCTCGTAAGGATGAGATTGCGGCTCTTGGTGGCCAGACTGCTACTGGCACCAACGTCTTTAGCGCCTTCTATGATCGATTGAAAGAGATTCGTGAATACCACAGACGACATCCTGCTGCTCGTGTTGTGGATGCTGGTGAGGAGTTTGAGCAGATGTTCAAGGAGGATCCAGTACTTGATTTTAGTGGAGAGGAAGCATATGGCCGATATTTAGATTTGCATGAATTCTACAATAGGTACATCAATTCAAAGTTCGGTGAACCAAAGGAGTACACTGCTTATCTAGAAGTTTTCTCACAGCCACATAAGATTCCTCTCAAGCATAAGATGACCAGACAGTACCGAGAGTACATCACTGATCTATTGGAGTATCTGATATCCTTCTTTGATAGGACAGAACCTTTACAAGATCTAGATAGAATTTTCTCAAAGGTAACAGATGAAATTGAAGAGCAATGGACAAATGGCAAAGTACATGGTTGGGAAATTGAGGGACAAGAGAATGGACATGTTCTTCAGCCTTCTGTGATCGATCTTGATTATTATAGTTCAGTTGAAGAGCTAATGGAAGTGGGGCCTGAAAAGTTGAAAGAGGCTTTAGCTGCACTAGGACTTAAGACAGGTGGTACGGTGCAGCAAAGAGCGGAGAGGCTTTTCCTCATCAAGAATACTCCTCTTGAGAAGTTGGATCGAAAACATTTTGCTAAACCTCCACTTAGGTTAGAGCAGAATGGCAATATGCTGACCCAGAAACAAGAAGATCTCAAAGAACTGGCTCTGATTGAAGCCAAGATGATGAAGCTATGTGAATTGCTGGATGAGACCATAGTGCGAACAAAAGAAAATGCTGTGAAGAAACAGGGGATGACTTATGATGAAATTGTGGCAGAGCATGAAGAGGAAGATATACAAGCTGATACAGAAAGCGATGAAGAAGACCAGCCTATATACAACCCCCTTAAGTTGCCACTTGGGTGGGATGGAAAACCTATACCATACTGGCTATATAAGCTCCATGGTCTTGGACAGGAATTCAAGTGTGAAATATGCGGGAACCACAGTTATTGGGGCCGAAGAGCTTTTGAGAGGCATTTTAAGGAATGGCGTCATCAACATGGAATGCGTTGCCTTGGCATTCCTAACACAAAGAACTTCAATGAGATCACTTCAATTCAGGATGCCAAGAATTTGTGGGAGAGGATTCAAGAAAGACAAGGGTTGCACAAGTGGCGCCCAGACCTTGAAGAGGAATATGAAGATCAAGAGGGTAACATTTATAATAAGAAGACATACACTGATTTGCAACGCCAGGGATTGATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85556.p1 GENE.S_Transcript_85556~~S_Transcript_85556.p1 ORF type:complete len:508 (+),score=119.01,DUF3449|PF11931.4|1e+03,DUF3449|PF11931.4|8.4e-76,Telomere_Sde2_2|PF13297.2|1.6e+03,Telomere_Sde2_2|PF13297.2|1.4e-26,SF3A3|PF16837.1|1.4e-25,SF3a60_bindingd|PF12108.4|1.4e-12,SF3a60_bindingd|PF12108.4|5.7e+02 S_Transcript_85556:306-1829(+)
MSSTLLEVTRSSHEEAERLERFIVKELQNEPTSSKDRLFQSHRVRFMIEQIILTTDKLVDIYEDKDGARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRRHPAARVVDAGEEFEQMFKEDPVLDFSGEEAYGRYLDLHEFYNRYINSKFGEPKEYTAYLEVFSQPHKIPLKHKMTRQYREYITDLLEYLISFFDRTEPLQDLDRIFSKVTDEIEEQWTNGKVHGWEIEGQENGHVLQPSVIDLDYYSSVEELMEVGPEKLKEALAALGLKTGGTVQQRAERLFLIKNTPLEKLDRKHFAKPPLRLEQNGNMLTQKQEDLKELALIEAKMMKLCELLDETIVRTKENAVKKQGMTYDEIVAEHEEEDIQADTESDEEDQPIYNPLKLPLGWDGKPIPYWLYKLHGLGQEFKCEICGNHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIQDAKNLWERIQERQGLHKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI*

Click here to download the sequence:
Link to NCBI Protein BLAST