Transcript Information: S_Transcript_85628.p1


Annotated TAIR IDAT4G12290.1
Annotated Gene NameCopper amine oxidase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7304434-7306973 | Forward length=741
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 140.725956435655
Replicate 253.151265752195
Replicate 360.307238929019
Condition 2: 8 Hour
Replicate 1142.43363312366
Replicate 2139.65457029647
Replicate 3121.20085249775
Condition 3: 24 Hour
Replicate 196.737328405317
Replicate 270.582476548377
Replicate 377.125259751181


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85628.p1 GENE.S_Transcript_85628~~S_Transcript_85628.p1 ORF type:complete len:726 (+),score=101.07,Cu_amine_oxid|PF01179.16|2.4e-133,Cu_amine_oxidN3|PF02728.12|9.1e+03,Cu_amine_oxidN3|PF02728.12|2.9e-27,Cu_amine_oxidN2|PF02727.12|1.5e-20 S_Transcript_85628:132-2309(+)
ATGGAAGGACGGAAGTTCTTAAGCTTCATTTCTCTACTCTTTGGACTTCTCATTTTTGTCTTTGTATTCACTTGGAATACTGACCTTCTCCCTTACAACACTCTCCACTCCCTTAACAAACTTGCTGAGGAGCTTGAGCTTGACCACCCTACTCACCACCTCACGCGCCGCCGCCACCACGACCACTCATCCGACGTTCCCCACCACCCTCTAGACCCCTTAACGGTCCAGGAGCTGAACCGGGTCCGGTCCATCCTTACCTCTCACTCGCTCTTCCGGTCGTCTTCTTCCAAGTCCTACGCGCTTCACTCGGTTGTTCTTGATGAGCCCCCTAAGTCACGTGTCCTCCTATGGAGGGGAGGGGATCCCTTGCCTCCTAGGAAGGCTTCTGTTATTGCACGTGTCGATGGCGAGTCGCACGTGCTTATCGTTGACATAGGGACAGGCCGGGTCTCCCGAGTTGGTTCGGGCCCCGTGTCTGGGTACCCGACTATGACTATTGAGGATATGAACACTGCTACTGCTACCCCCTTCTCGAGTTCCGAGTTTAATCGGACCGTGGTGGATCGTGGTGTTGATTTGGTTGATGTAGCTTGCTTGCCTATTTCTACTGGATGGTATGGGAAGAAAGAGGAAAAGAGGAGGTTAATTAAGGTACAATGCTACTCTATGAAGGAAACAGCCAACTTTTACATGAGGCCCATTGAAGGTTTGACAGTACTCGTAGATATGGACACAAATCAAGTGGTGGAGATTTCAGATCGTGGAAGGGACATACCCATCCCAAAGGCTGCCAACACAGACTATCGCTTCTCAGTCCTGAACAAAGCCCATCACAAAATCAGGCCAATCAACCCAATATCTATTGAGCAGCCCAAAGGCCCAAGTTTCACCGTTGAAAATGGATATCAGATCAAATGGGCAAACTGGGAATTTCACCTCAAACCCGACCCAAGAGCTGGGGTGATCATCTCTCGGGCCATGGTCCGAGACCCGGATACTGGAGAGCTAAGGAATGTCATGTATAAAGGGATGACCTCAGAGTTGTTTGTGCCTTACATGGATCCAACTGATGCATGGTATTTTAAGACGTATATGGATGCAGGTGAATATGGGTTTGGGTTACAAGCAATGCCCCTTGACCCGCTTAATGATTGCCCTAGGAATGCATATTACATGGATGGTGTGTTTGCTGCTGGTGATGGGAAGCCGTATATCCGAGAGAATATGGTCTGTGTTTATGAGAGCTATGCAGGTGATATTGGGTGGCGTCATTCAGAGAGTCCAATCACAGGGATGGAGATTCGTGAAGTCCGGCCGAAAGTGACATTAGTGGTTAGAATGGCAGCGTCAGTGGCTAACTACGATTACATTATGGACTGGGAATTTCAAACTGATGGACTCATTAGAATCAAGGTTGGGCTGAGTGGTATCTTGATGGTGAAGAGCACACCATACATGAACTTAAACCAAGTACCCAACCAAGAAATTCTTTATGGTACTATGTTGTCTGAAAATGTCATTGGAGTTATCCATGACAACTACATCACTTACTATCTCGACATGGACGTTGATGGATCGGATAATTCGTTTGTGAAAGTAAACCTCCAAAGGCAGCAAACCTCGGCTGGGGAGTCACCCCGGACAAGCTACTTGAAGACCATACGAAATCTTGCCAAGACGGAGAAGGATGCACAAATTAAGCTCAAGCTTTATGACCCCTCTGAGTTCCATATGATCAACCCAAATAAAAAGACTCGGGTGGGTAACCCAGTTGGATACAAGGTGGTTCCTGGTGGTACAGCAGCCAGCCTACTTGATCTAGAAGATCCACCTCAAAAGAGAGGAGCATTCACCAACAACCAAATATGGGTCACTCCATATAACCGAAGTGAGATTTGGGCTGGTGGGTTGTTTGTTTACCAGAGCCACGGCGAAGACACCCTTGCGACATGGTCAGAGAGGGATCGACCAATAGAGAACAAGGATATAGTGCTATGGTACACCTTAGGATTCCATCACATACCATGCCAAGAGGACTTCCCAATAATGCCAACAGTATCATCAAGCTTTGATTTGAAGCCTGTCAATTTCTTTGAAAGCAATCCCATCCTTGGAATTCCACCGAACTTTGAAAAGGACCTACCAGTTTGCCAAGCTGCTGCTTCTTCTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85628.p1 GENE.S_Transcript_85628~~S_Transcript_85628.p1 ORF type:complete len:726 (+),score=101.07,Cu_amine_oxid|PF01179.16|2.4e-133,Cu_amine_oxidN3|PF02728.12|9.1e+03,Cu_amine_oxidN3|PF02728.12|2.9e-27,Cu_amine_oxidN2|PF02727.12|1.5e-20 S_Transcript_85628:132-2309(+)
MEGRKFLSFISLLFGLLIFVFVFTWNTDLLPYNTLHSLNKLAEELELDHPTHHLTRRRHHDHSSDVPHHPLDPLTVQELNRVRSILTSHSLFRSSSSKSYALHSVVLDEPPKSRVLLWRGGDPLPPRKASVIARVDGESHVLIVDIGTGRVSRVGSGPVSGYPTMTIEDMNTATATPFSSSEFNRTVVDRGVDLVDVACLPISTGWYGKKEEKRRLIKVQCYSMKETANFYMRPIEGLTVLVDMDTNQVVEISDRGRDIPIPKAANTDYRFSVLNKAHHKIRPINPISIEQPKGPSFTVENGYQIKWANWEFHLKPDPRAGVIISRAMVRDPDTGELRNVMYKGMTSELFVPYMDPTDAWYFKTYMDAGEYGFGLQAMPLDPLNDCPRNAYYMDGVFAAGDGKPYIRENMVCVYESYAGDIGWRHSESPITGMEIREVRPKVTLVVRMAASVANYDYIMDWEFQTDGLIRIKVGLSGILMVKSTPYMNLNQVPNQEILYGTMLSENVIGVIHDNYITYYLDMDVDGSDNSFVKVNLQRQQTSAGESPRTSYLKTIRNLAKTEKDAQIKLKLYDPSEFHMINPNKKTRVGNPVGYKVVPGGTAASLLDLEDPPQKRGAFTNNQIWVTPYNRSEIWAGGLFVYQSHGEDTLATWSERDRPIENKDIVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPILGIPPNFEKDLPVCQAAASSA*

Click here to download the sequence:
Link to NCBI Protein BLAST