Transcript Information: S_Transcript_85742.p1


Annotated TAIR IDAT1G47550.2
Annotated Gene Nameexocyst complex component sec3A
Annotated Gene Symbol(s)SEC3A
Annotation TypeOrtholog
Chromosome Positionchr1:17457171-17463896 | Forward length=888
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.55204364119
Replicate 220.125799467883
Replicate 319.469526529369
Condition 2: 8 Hour
Replicate 123.654287332494
Replicate 223.856917821379
Replicate 323.210082456388
Condition 3: 24 Hour
Replicate 115.997751935296
Replicate 217.34970586412
Replicate 314.663351297621


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85742.p1 GENE.S_Transcript_85742~~S_Transcript_85742.p1 ORF type:complete len:934 (+),score=209.00,Sec3_C|PF09763.5|3.6e-49,Sec3_C|PF09763.5|1.7e-42,Sec3-PIP2_bind|PF15277.2|6.4e-17,Vps52|PF04129.8|5.7e-08,Vps52|PF04129.8|94 S_Transcript_85742:140-2803(+)
ATGGCGAAATCTAGCGCCGATGATCAAGAGCTCCGGCGAGCATGTGAAGCCGCCATTGAAGGTACCAAACAGAAGGTCATCATGTCGATCCGTGTCGCTAAGAGTCGCGGTGTTTGGGGGAAATCCGGCAAATTAGGCCGTCAAATGGCCAAACCTAGGGTTCTTGCCATTTCCATAAAACAAAAGGCACAGCGGACGAAAGCGTTCCTTCGTGTTCTAAAATATTCCACAGGAGGTGTTCTTGAGCCAGCAAAAATATACAAGCTGAAGCATCTCTCGAAGGTGGAGGTCAATACCAATGATCCCAGTGGATGTACATTTACTTTGGGGTTCGATAACCTTCGAAACCAAACAGTTGCTCCACCACAGTGGACTATGAGAAATGTTGATGATAGGAACCGCCTTCTACTTTGTATATTAAACGTGTGTAAAGATATGCTTGGTCGTCTACCTAAAGTTGTTGGAATTGATGTTGTGGAGATGGCTCTTTGGGCAAAGGAGAACACTACCACCACTACTACCGATCAGGTGAAATCGGATGATGGTCCTGTTCCTACTACGGTTACTGAAAAGGACATGCAGGTTACTGTTGAAAAGGAGCTTGTATCTCAAGCTGAGGAAGAAGACATGGAAGCTCTTCTTGGCACGTACGTCATGGGTATTGGTGAAGCGGAGGCTTTTTCTGAGAGGCTAAAGCGTGAGCTTCAAGCTTTGGAAGCAGCAAATGTGCATGCTATACTGGAGACAGAACCCTTGGTTGAACAGGTATCAAGAGGGCTTGATAATGCCTTGAACTGTGTGGATGATATGGATGAGTGGTTAGGGATTTTCAACGTCAAACTCAGACACATGAGAGAAGACATCGAGTCGATAGAAACCCGAAATAACAAGCTGGAAATGCAATCTGTAAATAACAAATCATTGATTGAAGAACTTGACAAGCTTCTGGAGCGGCTACGTATTCCTTCTGAGTATGCAGCATGTCTGACAGGAGGCTCCTTTGATGAAGCAAACATGATTAAAAACATAGAAGCATGCGAATGGCTAAGTGGTGCTCTTCGTGGTATAGAAGTTCCCAATCTGGATCCTACTTTCAAAAACATGCGAGCTGTACGAGAGAAGAAAGCTGAGCTCGAAAAGCTTAAAAGTACTTTTGTTCGTAGAGCATCTGAGTTCTTGAGGAACTACTTTGCCAGCTTGGTAGATTTCATGATAAGTGACAAGAGTTATTTTTCTCAACGTGGACAGCTGAAACGACCTGACCATGCTGATCTGCGGTACAAGTGTAGGACATATGCTCGCCTTCTTCAACATCTGAAGAGTCTTGATAAGAATTGCTTGGGTCCATTGAGGAAAGCATACTGTGCCTCTCTCAACTTACTCCTTCGAAGAGAGGCTCGGGAGTTTGCTAATGAGCTTCGAGCAAGCACTAAAGCTTCAAGGAATCCAACTGTTTGGCTGGATGCTGCTGCTGGTGCTGGCCAGAATGTTAGCAATGCAGACACTTCAGCAGTTTCTGATGCTTATGCCAAAATGCTTACAATATTTGTTCCCCTCCTTGTAGATGAGAGCTCCTTTTTTGCTCACTTCATGTGCTTTGAAGTTCCTGCACTTAATCCACCGGGAAGTGTTCCCAATGGCAAGTCTGCGTCAAATGGTGATGATGCCGATGATGATGATGATCTGGGAATTATGGATATTGATGACAGTGATAGTAAAAATGGTAAAAATTCTGTAGAGTTGGCAGCATTAAATGAATGTCTTCAAGAGTTGCTAGATGGAATCCAGGAAGACTTCTATGCTGTCGTGGATTGGGCATACAAAATTGACCCTCTGCGATGTATATCAATGCATGGGATTACAGAACGTTATCTTTCTGGTCAGAAAGCTGATGCAGCAGGATTTGTGCGCCTCTTGCTTGGCGACCTTGAATCAAGGATTTCCATGCAGTTCAGTAGATTTGTTGATGAAGCTTGTCATCAGATTGAAAGAAATGAGCGCAATGTCCGGCAAATGGGTGTTCTGTCATACATCCCAAGATTTGCTACACTTGCAACTCGTATGGAGCAGTACATTCAAGGACAATCCAGGGATTTGGTCGATCAGGCATATACAAAATTTGTCAGCATAATGTTTGTGACCTTGGAGAAAATTGCACAGACAGATCCAAAATACGCAGATGTCTTCCTTTTGGAGAATTATGCTGCATTTCAGAACAGCTTGTATGACCTTGCAAATGTTGTACCAACTCTAGCAAAGTTCTATCACCAAGCTAGCGAAGCATATGAACAAGCTTGCACGCGCCATATAAGTATGATCATATATTATCAATTTGAACGGCTCTTCCAATTTGCTAGAAGGATTGAAGATCTGATGTACACCATAACGCCAGAAGAGATTCCTTTCCAGCTTGGTTTGTCGAAAATGGATCTCAGGAAGGTGTTGAAAGCTAGCTTGTCTGGGGTTGACAAATCAATCCAAGCAATGTACAAGAAATTGCAGAAAAACTTAACTTCTGAGGAATTGCTGCCCTCTTTATGGGACAAATGCAAGAAAGAGTTTCTCGACAAATACGAGAGCTTTGCTCAACTTGTTGCCAAAGTTTATCCTACTGAGAATATCCCCTCCGTATCAGAAATGAGAGATCTTTTGGCCTCCATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85742.p1 GENE.S_Transcript_85742~~S_Transcript_85742.p1 ORF type:complete len:934 (+),score=209.00,Sec3_C|PF09763.5|3.6e-49,Sec3_C|PF09763.5|1.7e-42,Sec3-PIP2_bind|PF15277.2|6.4e-17,Vps52|PF04129.8|5.7e-08,Vps52|PF04129.8|94 S_Transcript_85742:140-2803(+)
MAKSSADDQELRRACEAAIEGTKQKVIMSIRVAKSRGVWGKSGKLGRQMAKPRVLAISIKQKAQRTKAFLRVLKYSTGGVLEPAKIYKLKHLSKVEVNTNDPSGCTFTLGFDNLRNQTVAPPQWTMRNVDDRNRLLLCILNVCKDMLGRLPKVVGIDVVEMALWAKENTTTTTTDQVKSDDGPVPTTVTEKDMQVTVEKELVSQAEEEDMEALLGTYVMGIGEAEAFSERLKRELQALEAANVHAILETEPLVEQVSRGLDNALNCVDDMDEWLGIFNVKLRHMREDIESIETRNNKLEMQSVNNKSLIEELDKLLERLRIPSEYAACLTGGSFDEANMIKNIEACEWLSGALRGIEVPNLDPTFKNMRAVREKKAELEKLKSTFVRRASEFLRNYFASLVDFMISDKSYFSQRGQLKRPDHADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCASLNLLLRREAREFANELRASTKASRNPTVWLDAAAGAGQNVSNADTSAVSDAYAKMLTIFVPLLVDESSFFAHFMCFEVPALNPPGSVPNGKSASNGDDADDDDDLGIMDIDDSDSKNGKNSVELAALNECLQELLDGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSGQKADAAGFVRLLLGDLESRISMQFSRFVDEACHQIERNERNVRQMGVLSYIPRFATLATRMEQYIQGQSRDLVDQAYTKFVSIMFVTLEKIAQTDPKYADVFLLENYAAFQNSLYDLANVVPTLAKFYHQASEAYEQACTRHISMIIYYQFERLFQFARRIEDLMYTITPEEIPFQLGLSKMDLRKVLKASLSGVDKSIQAMYKKLQKNLTSEELLPSLWDKCKKEFLDKYESFAQLVAKVYPTENIPSVSEMRDLLASM*

Click here to download the sequence:
Link to NCBI Protein BLAST