Transcript Information: S_Transcript_85793.p1


Annotated TAIR IDAT5G39790.1
Annotated Gene Name5'-AMP-activated protein kinase-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15932884-15935121 | Reverse length=273
E-Value3E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41367359432923
Replicate 20
Replicate 30.47779109024872
Condition 2: 8 Hour
Replicate 13.5358160111309
Replicate 20
Replicate 32.2088961248685
Condition 3: 24 Hour
Replicate 11.3582310978608
Replicate 22.2311524349772
Replicate 31.1761575111194


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85793.p1 GENE.S_Transcript_85793~~S_Transcript_85793.p1 ORF type:complete len:193 (+),score=42.62 S_Transcript_85793:215-793(+)
ATGGGGAGCCACGCTGTTGGTCTTGTGAGGTGCTGGCCAGATGATCAGGTTTTGTGCCGGCAGACTTTTGTTATATCAAATTTCAATAGCCTTTGTCATATCCGCTATAATGTGGCACCAAGAACCATGCGAGCTTGTTCAAACAACTTTTCTCATCTTCTTCAAGCCTCAACTGAGAAGCATCCATCTTGCAGTCAAATCTGCCGCACTTATTCTGTACCGGTTGACTTGGAGGAGCAGTCACTGTCAGGATCTCCAGACATCCAGGATGATGAAACTGATTTGTTGGATCCAGCCAAAAAACTTGATAAGCCACTTAGCAGTGATCAGTTGAAGTCATTGCTTGCAGATTCTGAAAGGGCAAAGCTTGTCAAGAAACTCAGTGAAGCAAATCAACAGAACCGGTTTCTGAAACGACAGCCCTACAGAGAAGTTGTGTGGAGTTGTACAAGAAATCACTTCCCAACCATGGTGAGAAAGACATCTACAGGATCGCAAAGAAAAAAAAAGGCCATTGCCCGGTATGGTGGGCTTTGGAGAAAGGGCATTTCCCATTACAAGGGAAAGAAGATGCACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85793.p1 GENE.S_Transcript_85793~~S_Transcript_85793.p1 ORF type:complete len:193 (+),score=42.62 S_Transcript_85793:215-793(+)
MGSHAVGLVRCWPDDQVLCRQTFVISNFNSLCHIRYNVAPRTMRACSNNFSHLLQASTEKHPSCSQICRTYSVPVDLEEQSLSGSPDIQDDETDLLDPAKKLDKPLSSDQLKSLLADSERAKLVKKLSEANQQNRFLKRQPYREVVWSCTRNHFPTMVRKTSTGSQRKKKAIARYGGLWRKGISHYKGKKMH*

Click here to download the sequence:
Link to NCBI Protein BLAST