Transcript Information: S_Transcript_85796.p1


Annotated TAIR IDAT5G39790.1
Annotated Gene Name5'-AMP-activated protein kinase-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15932884-15935121 | Reverse length=273
E-Value3.6E-102
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.266251543976
Replicate 227.946200106185
Replicate 329.323950372925
Condition 2: 8 Hour
Replicate 135.115809388879
Replicate 236.83897742675
Replicate 333.679039215871
Condition 3: 24 Hour
Replicate 128.034267146263
Replicate 227.649850123144
Replicate 330.43460024884


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85796.p1 GENE.S_Transcript_85796~~S_Transcript_85796.p1 ORF type:complete len:300 (+),score=71.48,AMPK1_CBM|PF16561.1|3.6e-15 S_Transcript_85796:229-1128(+)
ATGGGGAGCCACGCTGTTGGTCTTGTGAGGTGCTGGCCAGATGATCAGGTTTTGTGCCGGCAGACTTTTGTTATATCAAATTTCAATAGCCTTTGTCATATCCGCTATAATGTGGCACCAAGAACCATGCGAGCTTGTTCAAACAACTTTTCTCATCTTCTTCAAGCCTCAACTGAGAAGCATCCATCTTGCAGTCAAATCTGCCGCACTTATTCTGTACCGGTTGACTTGGAGGAGCAGTCACTGTCAGGATCTCCAGACATCCAGGATGATGAAACTGATTTGTTGGATCCAGCCAAAAAACTTGATAAGCCACTTAGCAGTGATCAGTTGAAGTCATTGCTTGCAGATTCTGAAAGGGCAAAGCTTGTCAAGAAACTCAGTGAAGCAAATCAACAGAACCGGTTTCTGAAACGACAGTTACAAGGGAAAGAAGATGCACTGATCAATTTCAAGAGTGAACTTGCTGTTTTGGAACAAGAGATTCAGGCACTTGTTGCACTTGCAGATGAAATTGCTAAAGCAGGCATTCCAGAAGGTTCCAGAAAGATTAATGGAAAGTACATCCATACCCATCTACTTTCCCGATTAGAAGCTGTACAACAAAAATTAATGGACCAGATAAAGGATGTGGACGCAGCGCAGTCCAAGGAGGTGGCTGTATTCTGGGTTGGCATGGCTGAGAGTGTACAAGTGATGGGTAGCTTTGATGGATGGAGTCAAGGAGAGCACTTATCCCCGGAGTACACGGGTTCGCACACCAAATTCTCGTCAACATTGTTGCTTCGACCTGGACGGTATGAGATCAAATTCTTGGTGGATGGGGAGTGGCAGATATCACCAGAATTCCCTATAGTTGGCGGGGGCCTTATGAAAAATAATCTACTGGTTGTTGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85796.p1 GENE.S_Transcript_85796~~S_Transcript_85796.p1 ORF type:complete len:300 (+),score=71.48,AMPK1_CBM|PF16561.1|3.6e-15 S_Transcript_85796:229-1128(+)
MGSHAVGLVRCWPDDQVLCRQTFVISNFNSLCHIRYNVAPRTMRACSNNFSHLLQASTEKHPSCSQICRTYSVPVDLEEQSLSGSPDIQDDETDLLDPAKKLDKPLSSDQLKSLLADSERAKLVKKLSEANQQNRFLKRQLQGKEDALINFKSELAVLEQEIQALVALADEIAKAGIPEGSRKINGKYIHTHLLSRLEAVQQKLMDQIKDVDAAQSKEVAVFWVGMAESVQVMGSFDGWSQGEHLSPEYTGSHTKFSSTLLLRPGRYEIKFLVDGEWQISPEFPIVGGGLMKNNLLVVE*

Click here to download the sequence:
Link to NCBI Protein BLAST