Transcript Information: S_Transcript_85848.p1


Annotated TAIR IDAT3G04090.1
Annotated Gene Namesmall and basic intrinsic protein 1A
Annotated Gene Symbol(s)SIP1;1, SIP1A
Annotation TypeHomolog
Chromosome Positionchr3:1072340-1074031 | Reverse length=240
E-Value3E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.6646980765704
Replicate 210.261762584891
Replicate 312.867025174605
Condition 2: 8 Hour
Replicate 113.018406879645
Replicate 212.746750969147
Replicate 310.410065109409
Condition 3: 24 Hour
Replicate 110.668431472151
Replicate 27.2471490505762
Replicate 37.625269238756


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85848.p1 GENE.S_Transcript_85848~~S_Transcript_85848.p1 ORF type:5prime_partial len:172 (+),score=27.25,MIP|PF00230.16|4.6e-17 S_Transcript_85848:2-517(+)
GCGTCGTTTTATGCTGCTGGCGTTCCTATTCCTGGCGATTCTCTGCTTTCTATGGCCTTCCGCTTCCCTGCTCAGGCTGCTGGTGCTGTGGCTGGGGCTATAGCAATCTCAGAAGTGATGCCGAGTCAGTACAAACACATGCTAGGAATACCTTCAATTAAAGTGGACTTGCATACTGCGGCCATAGCTGAAGGTGTATTGACGTTTCTTATAAGCTTGGCTGTTCTCATCATAATGCTCAGGATTCGGGGAAGCACATTGATAAAGACATGGTTGCTTGCCATGACTACCGTGACTTTGGTTGTTAATGGTTCTGGTTATACCGGACCTTCAATGAATCCTGCTAATGCTTTTGGATGGGCATATGTAAACAATTGGCATAACACATGGGATCAGTTTTATGTATATTGGATCTGCCCCTTTATAGGTGCAATCATGGCTGCTTGGGTGTTTCGACTCATCTTCCCTCAACCGAAAAAGCAGAAGAGAGCCCCAAAGAGAAGGAAAGTAGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85848.p1 GENE.S_Transcript_85848~~S_Transcript_85848.p1 ORF type:5prime_partial len:172 (+),score=27.25,MIP|PF00230.16|4.6e-17 S_Transcript_85848:2-517(+)
ASFYAAGVPIPGDSLLSMAFRFPAQAAGAVAGAIAISEVMPSQYKHMLGIPSIKVDLHTAAIAEGVLTFLISLAVLIIMLRIRGSTLIKTWLLAMTTVTLVVNGSGYTGPSMNPANAFGWAYVNNWHNTWDQFYVYWICPFIGAIMAAWVFRLIFPQPKKQKRAPKRRKVD*

Click here to download the sequence:
Link to NCBI Protein BLAST