Transcript Information: S_Transcript_85850.p1


Annotated TAIR IDAT3G04090.1
Annotated Gene Namesmall and basic intrinsic protein 1A
Annotated Gene Symbol(s)SIP1;1, SIP1A
Annotation TypeHomolog
Chromosome Positionchr3:1072340-1074031 | Reverse length=240
E-Value4E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52182355363099
Replicate 21.8746161061941
Replicate 30.60270379358172
Condition 2: 8 Hour
Replicate 11.1150530884775
Replicate 20.87732739763634
Replicate 30.97523485774425
Condition 3: 24 Hour
Replicate 10.57110806511357
Replicate 21.0369064119897
Replicate 30.65939985372853


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85850.p1 GENE.S_Transcript_85850~~S_Transcript_85850.p1 ORF type:5prime_partial len:153 (+),score=26.43 S_Transcript_85850:2-460(+)
GCGTCGTTTTATGCTGCTGGCGTTCCTATTCCTGGCGATTCTCTGCTTTCTATGGCCTTCCGCTTCCCTGCTCAGGCTGCTGGTGCTGTGGCTGGGGCTATAGCAATCTCAGAAGTGATGCCGAGTCAGTACAAACACATGCTAGGAATACCTTCAATTAAAGTGGACTTGCATACTGCGGCCATAGCTGAAGGTGTATTGACGTTTCTTATAAGCTTGGCTGTTCTCATCATAATGCTCAGGATTCGGGGAAGCACATTGATAAAGACATGGTTGCTTGCCATGACTACCGTGACTTTGGTTGTTAATGGTTCTGGTTATACCGGACCTTCAATGAATCCTGCTAATGTGCAATCATGGCTGCTTGGGTGTTTCGACTCATCTTCCCTCAACCGAAAAAGCAGAAGAGAGCCCCAAAGAGAAGGAAAGCGGATTAGCTTGATTTTTTTTGTTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85850.p1 GENE.S_Transcript_85850~~S_Transcript_85850.p1 ORF type:5prime_partial len:153 (+),score=26.43 S_Transcript_85850:2-460(+)
ASFYAAGVPIPGDSLLSMAFRFPAQAAGAVAGAIAISEVMPSQYKHMLGIPSIKVDLHTAAIAEGVLTFLISLAVLIIMLRIRGSTLIKTWLLAMTTVTLVVNGSGYTGPSMNPANVQSWLLGCFDSSSLNRKSRREPQREGKRISLIFFVL*

Click here to download the sequence:
Link to NCBI Protein BLAST