Transcript Information: S_Transcript_85853.p1


Annotated TAIR IDAT3G04090.1
Annotated Gene Namesmall and basic intrinsic protein 1A
Annotated Gene Symbol(s)SIP1;1, SIP1A
Annotation TypeHomolog
Chromosome Positionchr3:1072340-1074031 | Reverse length=240
E-Value4E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17624504129259
Replicate 20.43833356736784
Replicate 30.48854930022783
Condition 2: 8 Hour
Replicate 10
Replicate 20.88894762806861
Replicate 30.14116455367537
Condition 3: 24 Hour
Replicate 10.28933620517343
Replicate 20.15009146739303
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85853.p1 GENE.S_Transcript_85853~~S_Transcript_85853.p1 ORF type:5prime_partial len:151 (+),score=26.30 S_Transcript_85853:3-455(+)
AGTTATTGTCCCACCGCAAACGCGTCGTTTTATGCTGCTGGTGTTCCTGTTCCTGGCGATTCTCTGCTTTCTATGGCCTTCCGCTTCCCTGCTCAGGCTGCTGGTGCTGTGGCTGGGGCTATAGCAATCTCAGAAGTGATGCCGAGTCAGTACAAACACATGCTAGGAATACCTTCAATTAAAGTGGACTTGCATACTGCGGCCATAGCTGAAGGTGTATTGACGTTTCTTATAAGCTTGGCTGTTCTCATCATAATGCTCAGGATTCGGGGAAGCACATTGATAAAGACATGGTTGCTTGCCATGACTACCGTGACTTTGGTTGTTAATGGTTCTGGTTATACCGGACCTTCAATGAATCCTGCTAATGTGCAATCATGGCTGCTTGGGTGTTTCGACTCATCTTCCCTCAACCGAAAAAGCAGAAGAGAGCCCCAAAGAGAAGGAAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85853.p1 GENE.S_Transcript_85853~~S_Transcript_85853.p1 ORF type:5prime_partial len:151 (+),score=26.30 S_Transcript_85853:3-455(+)
SYCPTANASFYAAGVPVPGDSLLSMAFRFPAQAAGAVAGAIAISEVMPSQYKHMLGIPSIKVDLHTAAIAEGVLTFLISLAVLIIMLRIRGSTLIKTWLLAMTTVTLVVNGSGYTGPSMNPANVQSWLLGCFDSSSLNRKSRREPQREGK*

Click here to download the sequence:
Link to NCBI Protein BLAST