Transcript Information: S_Transcript_85862.p1


Annotated TAIR IDAT1G61000.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Kinetochore protein Nuf2 (InterPro:IPR005549); Has 50972 Blast hits to 29793 proteins in 2070 species: Archae - 902; Bacteria - 7404; Metazoa - 23628; Fungi - 4156; Plants - 2312; Viruses - 158; Other Eukaryotes - 12412 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22471096-22474046 | Reverse length=440
E-Value7.7E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.0499823149304
Replicate 26.9724391378151
Replicate 35.287195220355
Condition 2: 8 Hour
Replicate 18.3279740967585
Replicate 28.5851337895113
Replicate 38.4685985970129
Condition 3: 24 Hour
Replicate 15.572171183831
Replicate 26.7019397663691
Replicate 36.7752218605165


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85862.p1 GENE.S_Transcript_85862~~S_Transcript_85862.p1 ORF type:complete len:443 (+),score=105.11,Nuf2|PF03800.10|6.2e-27,Nuf2|PF03800.10|3e+03,Nuf2|PF03800.10|1.1e+04 S_Transcript_85862:104-1432(+)
ATGGCGGCAACAGCAGGTTACTCGCTTCCAACACTACCTCGCCATGAAATCGTCAAGGTTATGTCTGATTACCAGATTCTCAATCTCTCCGAATCCGACCTCGTAAACCCTACCCCTAATTTCGTCTTCAATCTCTACACCTCTCTCTTAATGCACCTCGATTCTCTCCAGGAAGATCCAAGCCAGGTGGACTTTGCGGCGTTGGAGAGGTTCGAGAATCCAGATATGCATGTGGATTCGGTTAGGGCAATGAATTTGTTTAGTAAGATAAGAGACTTTTTGGCCACAATTGAGTCCCCCTTTGCCTTCACCTTTGATGATTTGATTCGCCCTGACTCCAATCGTACTCTCAAGTTCCTCTCTGCCTTCCTTAACTTCTTCTTTCACAAGGATACAAAATTGAGCATGTTGAGGCCATATGCGGAGGAACTTAGTGCACTTGATGAGCAGCGGAAAGAGAGGGAGGCTAGAATTTCTCAGTTGAAGGAAGAACTTGCAGGACTAAATGAAGCCAGGGAAAGGGAGAAACCTCTTGTCCTAGAAGCAGAGGCAAAGGTAAAGGAATTGCGACAAACAATTGATAACCTCAATAGCCTTCAATCGAACTTGAGGAAGGAGCGTCAGTCAATGAAGGAAAAGGCACAAGAAATGCATGCAAATCTTTCTAAAGCAGAGTTTGAACTCATTCAAGCTACGGAAGAAAATGCCATTTTACGTTCTAAAATAGTTCAGTCACCAGACAAACTTCAGAGGACTTTAGAGGAGAAGAAAGTAGTTCAGATGGAGGCAAAGGACTCAGAAAGACTGGCCATGCAAAACTTTCAAGAAAAGACCTCCATTTTGGAGGTCTATACTAAGGCGTGGGAGAAAATGACAAAGCAGTTGGCTCAGATGCAAGCGATACAAGAACAGGCAAATTCTGCCAAAGCTGTTGAAAAGGATGTTAAGCAACTGAAGACTAAGTTAAGTGATGAGCAAATGCTAGACATATCACTTGAAGCCAAATTAGTTGAATTACAAGCCAAAGCTGAACAGTTAGATGTACACAAAAGTCAGTTAGAGAAGGACGGAAAACTCAGGCGTGAGGAGGATACAAAGGGACTGAACAATGTGAAGTTAGAGGCAGAATCAAGGAGCTGTGATCTGGAAGCAAGGGGAAGGAAGATTGAAGCTGTGCTAACTGAGGTGGATGCGATAAAAGCAAAGATTGATTCAACGAAGGAGTTGACCGCTGCAACACTACAACAGTTGCTGATAAAAGGCAAAGATATAGTGAAGGAGTTTAATCAGTACTCAGGCTCTATTGTACAATCAAGCATGGAGTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85862.p1 GENE.S_Transcript_85862~~S_Transcript_85862.p1 ORF type:complete len:443 (+),score=105.11,Nuf2|PF03800.10|6.2e-27,Nuf2|PF03800.10|3e+03,Nuf2|PF03800.10|1.1e+04 S_Transcript_85862:104-1432(+)
MAATAGYSLPTLPRHEIVKVMSDYQILNLSESDLVNPTPNFVFNLYTSLLMHLDSLQEDPSQVDFAALERFENPDMHVDSVRAMNLFSKIRDFLATIESPFAFTFDDLIRPDSNRTLKFLSAFLNFFFHKDTKLSMLRPYAEELSALDEQRKEREARISQLKEELAGLNEAREREKPLVLEAEAKVKELRQTIDNLNSLQSNLRKERQSMKEKAQEMHANLSKAEFELIQATEENAILRSKIVQSPDKLQRTLEEKKVVQMEAKDSERLAMQNFQEKTSILEVYTKAWEKMTKQLAQMQAIQEQANSAKAVEKDVKQLKTKLSDEQMLDISLEAKLVELQAKAEQLDVHKSQLEKDGKLRREEDTKGLNNVKLEAESRSCDLEARGRKIEAVLTEVDAIKAKIDSTKELTAATLQQLLIKGKDIVKEFNQYSGSIVQSSMEC*

Click here to download the sequence:
Link to NCBI Protein BLAST