Transcript Information: S_Transcript_85877.p1


Annotated TAIR IDAT1G62350.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:23056653-23057935 | Forward length=196
E-Value7.1E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.006611621957
Replicate 28.3075935988173
Replicate 39.5629001914966
Condition 2: 8 Hour
Replicate 18.55648376922
Replicate 27.3191850487994
Replicate 34.7368550233292
Condition 3: 24 Hour
Replicate 17.4164727900165
Replicate 24.336902215227
Replicate 34.2036740675193


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85877.p1 GENE.S_Transcript_85877~~S_Transcript_85877.p1 ORF type:internal len:162 (+),score=15.52 S_Transcript_85877:1-483(+)
GGTACCCAAAACCAAATTTTAGCTAAAGTTCAAACCCCAATTGTATACTTAACTCCTCTCAAGTCTCAACTATCAACTCTCAAGAGTAAATACATTCAAGAAACTCAAATTCTTTTAGTAAGGAAAATATCGATGCTTGGATTCAGACGAACACTACTACGCCGAGCAATTCTCCATTTTCGTCCTAAAACCCTAATTCCCACCACACAACAGCTGTTGTTTCTGCAACACATAACAACCCATACAAGAACAGGCGGTTCATTAGGAAGAGGTTCTTCGAGCCCAAGTGTGTCAATATGGAGGAGAAAGAAAGAGATGGGAAAAGAAGGGTTGATTGTTGCTAAAGAGTTGAAGCGTTTACAATCAAACCCACTTCGTTTACAGCGTTTTATTCAATCCCATGTCTCTCGCCTTCTCAAGTCTGATCTTGTTTCTGTTTTGGCTGAGTTTCAGCGCCAAGATCAAGTCTTTCTCTCTATGAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85877.p1 GENE.S_Transcript_85877~~S_Transcript_85877.p1 ORF type:internal len:162 (+),score=15.52 S_Transcript_85877:1-483(+)
GTQNQILAKVQTPIVYLTPLKSQLSTLKSKYIQETQILLVRKISMLGFRRTLLRRAILHFRPKTLIPTTQQLLFLQHITTHTRTGGSLGRGSSSPSVSIWRRKKEMGKEGLIVAKELKRLQSNPLRLQRFIQSHVSRLLKSDLVSVLAEFQRQDQVFLSMK

Click here to download the sequence:
Link to NCBI Protein BLAST