Transcript Information: S_Transcript_85879.p2


Annotated TAIR IDAT1G62350.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:23056653-23057935 | Forward length=196
E-Value1.7E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26091177681549
Replicate 21.081509292035
Replicate 30.90405569037258
Condition 2: 8 Hour
Replicate 10.41814490817908
Replicate 21.3159910964545
Replicate 30
Condition 3: 24 Hour
Replicate 11.4991586709231
Replicate 20.66658269342198
Replicate 30.49454989029639


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85879.p2 GENE.S_Transcript_85879~~S_Transcript_85879.p2 ORF type:5prime_partial len:102 (+),score=15.64 S_Transcript_85879:2-307(+)
ATAACAACCCATACAAGAACAGGCGGTTCATTAGGAAGAGGTTCTTCGAGCCCAAGTGTGTCAATATGGAGGAGAAAGAAAGAGATGGGAAAAGAAGGGTTGATTGTTGCTAAAGAGTTGAAGCGTTTACAATCAAACCCACTTCGTTTACAGCGTTTTATTCAATCCCATGTCTCTCGCCTTCTCAAGTCTGATCTTGTTTCTGTTTTGGCTGAGTTTCAGCGCCAAGATCAAGTCTTTCTCTCTATGAAGGTATCCAAATTCTGTCTTTTAATGTTTTTATGCAAGAAAGTTGCAATTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85879.p2 GENE.S_Transcript_85879~~S_Transcript_85879.p2 ORF type:5prime_partial len:102 (+),score=15.64 S_Transcript_85879:2-307(+)
ITTHTRTGGSLGRGSSSPSVSIWRRKKEMGKEGLIVAKELKRLQSNPLRLQRFIQSHVSRLLKSDLVSVLAEFQRQDQVFLSMKVSKFCLLMFLCKKVAIL*

Click here to download the sequence:
Link to NCBI Protein BLAST