Transcript Information: S_Transcript_85881.p1


Annotated TAIR IDAT1G62350.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:23056653-23057935 | Forward length=196
E-Value6.7E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.382650706102
Replicate 210.190436432395
Replicate 38.5183937964613
Condition 2: 8 Hour
Replicate 18.0328824512967
Replicate 28.9286750176487
Replicate 310.51454366165
Condition 3: 24 Hour
Replicate 110.383666591942
Replicate 29.7566184364545
Replicate 38.9351637130232


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85881.p1 GENE.S_Transcript_85881~~S_Transcript_85881.p1 ORF type:5prime_partial len:223 (+),score=50.16,PPR_2|PF13041.2|0.0029,PPR_2|PF13041.2|0.055 S_Transcript_85881:2-670(+)
ATAACAACCCATACAAGAACAGGCGGTTCATTAGGAAGAGGTTCTTCGAGCCCAAGTGTGTCAATATGGAGGAGAAAGAAAGAGATGGGAAAAGAAGGGTTGATTGTTGCTAAAGAGTTGAAGCGTTTACAATCAAACCCACTTCGTTTACAGCGTTTTATTCAATCCCATGTCTCTCGCCTTCTCAAGTCTGATCTTGTTTCTGTTTTGGCTGAGTTTCAGCGCCAAGATCAAGTCTTTCTCTCTATGAAGTTGTATGATGTAGTGCGTAAAGAGATATGGTACCGCCCAGACATGTTCTTTTACAGGGATATGCTTATGATGCTTGCAAGGAACAAAAAGGTAGAGGAAGCAAAACAGGTATGGGCAGACTTGAAGAGTGAAGAAGTCTTATTTGATCAGCACACTTTTGGCGACATCATGAGGGCTTTTTTGGACAATGCATTACCCAATGAGGCGATGGAAATATATGATGAAATGAGGCAGTCTCCTGATCCACCCCTCTCATTGCCTTACCGGGTCATTCTGAAAGGACTCATTCCTTACCCTGAGCTACGGGAGAGGGTCAAGGATGACTTTTTAGAGCTTTTCCCTGGTAAATTTGTTTATGATCCTCCAGAAGATCTCTTTGAGGACGAGCAATGGAGAACAGAGTGTGAAGAGGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85881.p1 GENE.S_Transcript_85881~~S_Transcript_85881.p1 ORF type:5prime_partial len:223 (+),score=50.16,PPR_2|PF13041.2|0.0029,PPR_2|PF13041.2|0.055 S_Transcript_85881:2-670(+)
ITTHTRTGGSLGRGSSSPSVSIWRRKKEMGKEGLIVAKELKRLQSNPLRLQRFIQSHVSRLLKSDLVSVLAEFQRQDQVFLSMKLYDVVRKEIWYRPDMFFYRDMLMMLARNKKVEEAKQVWADLKSEEVLFDQHTFGDIMRAFLDNALPNEAMEIYDEMRQSPDPPLSLPYRVILKGLIPYPELRERVKDDFLELFPGKFVYDPPEDLFEDEQWRTECEED*

Click here to download the sequence:
Link to NCBI Protein BLAST