Transcript Information: S_Transcript_85893.p1


Annotated TAIR IDAT4G25500.1
Annotated Gene Namearginine/serine-rich splicing factor 35
Annotated Gene Symbol(s)ATRSP35, ATRSP40, AT-SRP40, RSP35, RS40, At-RS40
Annotation TypeOrtholog
Chromosome Positionchr4:13025168-13027243 | Forward length=350
E-Value1.2E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.418319950511
Replicate 211.865701946899
Replicate 38.9888965785616
Condition 2: 8 Hour
Replicate 114.515601812502
Replicate 213.911905876805
Replicate 315.762979741499
Condition 3: 24 Hour
Replicate 114.502065510563
Replicate 213.52210606656
Replicate 311.657247414129


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85893.p1 GENE.S_Transcript_85893~~S_Transcript_85893.p1 ORF type:complete len:119 (+),score=18.38,RRM_1|PF00076.18|0.38,RRM_1|PF00076.18|2.3e-12,RRM_6|PF14259.2|1e+02,RRM_6|PF14259.2|4.5e-10,RRM_5|PF13893.2|2.4,RRM_5|PF13893.2|4.1e-07,Nup35_RRM_2|PF14605.2|5.6e-06 S_Transcript_85893:2590-2946(+)
ATGGAAGATGAAAGAGATGCTGATGATGCTATCAGAAAACTAGACCGGTACGAGTTTGGCAGGAGGGGACGCCGTCTTCGTGTTGAGTGGACTAAGCAAGAAAGAGACAACCGAAGATCAGGTGGTGGACGAAAGCCTGCAGCTAATGACAGGCCCTCTAAAACCTTGTTTGTCATTAATTTTGACCCAATTTACACAAAATCCAAGGACTTGGAAAGACACTTTGATCCATATGGGAAGATAGTTAACATACGGATCCGGAGAAACTTTGCATTCATTCAGTTTGAAACCCAGGAGGATGCAACCCGGGCATTCGAAGCGACGAATATGAGGTTTGGTCAAATTCCAGTACTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85893.p1 GENE.S_Transcript_85893~~S_Transcript_85893.p1 ORF type:complete len:119 (+),score=18.38,RRM_1|PF00076.18|0.38,RRM_1|PF00076.18|2.3e-12,RRM_6|PF14259.2|1e+02,RRM_6|PF14259.2|4.5e-10,RRM_5|PF13893.2|2.4,RRM_5|PF13893.2|4.1e-07,Nup35_RRM_2|PF14605.2|5.6e-06 S_Transcript_85893:2590-2946(+)
MEDERDADDAIRKLDRYEFGRRGRRLRVEWTKQERDNRRSGGGRKPAANDRPSKTLFVINFDPIYTKSKDLERHFDPYGKIVNIRIRRNFAFIQFETQEDATRAFEATNMRFGQIPVL*

Click here to download the sequence:
Link to NCBI Protein BLAST