Transcript Information: S_Transcript_85992.p1


Annotated TAIR IDAT5G13300.1
Annotated Gene NameARF GTPase-activating protein
Annotated Gene Symbol(s)SFC, VAN3, AGD3
Annotation TypeOrtholog
Chromosome Positionchr5:4255923-4262018 | Reverse length=827
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.091002965022
Replicate 211.084430330578
Replicate 310.329705546824
Condition 2: 8 Hour
Replicate 123.042699393152
Replicate 222.721408774722
Replicate 323.877848519042
Condition 3: 24 Hour
Replicate 19.4521130488148
Replicate 29.7247364576394
Replicate 39.5492115235716


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_85992.p1 GENE.S_Transcript_85992~~S_Transcript_85992.p1 ORF type:complete len:832 (+),score=164.02,BAR_3|PF16746.1|5.2e-40,ArfGap|PF01412.14|8.8e+03,ArfGap|PF01412.14|5.9e-34,Ank_5|PF13857.2|1.3e+04,Ank_5|PF13857.2|4.1e-06,Ank_5|PF13857.2|1.6e-11,Ank_2|PF12796.3|1.4e-07,Ank_2|PF12796.3|8.1e-09,BAR|PF03114.14|5.3e-15,Ank_4|PF13637.2|5.3e+03,Ank_4|PF13637.2|8.8e-10,Ank_4|PF13637.2|0.00047,PH|PF00169.25|4.8e-12,Ank|PF00023.26|1.8e-05,Ank|PF00023.26|0.0088,Ank|PF00023.26|1.2e+03,Ank_3|PF13606.2|7.5e+03,Ank_3|PF13606.2|1.6e+04,Ank_3|PF13606.2|0.0062,Ank_3|PF13606.2|0.64 S_Transcript_85992:147-2642(+)
ATGCATTTCGGAAAGCTTGACGACTCTCCTATGTTCCGTCAACAGTTACAGTGCTTGGAGGAGAGTGCTGAATCATTAAGGGATAGATGTCAAAAATTCTACAAAGGAAGTCGTAAGTACACAGAAGGGCTTGGTGAGGCATATGATGGTGATATTGCTTTTGCTAGTGCTTTGGAAACATTTGGGGGAGGGCATAATGACCCGATAAGTGTTGCTTTTGGAGGCCCTGTTATGACGAAATTTACTATTGCATTAAGAGAAATTGGAACATATAAGGAAGTACTACGTTCTCAGGTTGAGCACATGCTTAATGACAGGTTGTTACAATTTGTCAATATTGATTTACATGATGTGAAGGAAGCTCGAAAACGTTTTGACAAGGCAAGTCTTGCATACGATCAGGCTCGGGAGAAGTTCCTGTCCCTGAGGAAAGGAACAAAAAGTGATGTTGCTGCAATCTTGGAGGAGGAGCTCCATCAGGCACGATCTACATTTGAGCAAGCTCGTTTTAATCTGGTAACTACTCTTTCTAACATTGAAGCGAAGAAAAGGTTTGAATTTCTGGAAGCAGTTAGTGGGACCATGGATGCACATCTCCGCTATTTCAAACAGGGCTATGAACTGTTGCATCAGATGGGACCATATATAAATCAGGTCTTGACTTATGCTCAGCAATCAAGAGAAAGGTCCAACTATGAGCAGGCAGCTCTTAATGAAAGAATGCAAGAGTACAAAAGACAAATTGATCGAGAGAGTCGGTGGTGTTCCAATGGATCTAATGGATCTCCTAATGGTGATGGTATTCAAGCAATTGGTAGAAGTTCACACAAAACAATAGAGGCGGTTATGCAATCTGCAGCCAAGGGAAAGGTTCAAACCATAAGGCAGGGTTATCTTTCAAAACGTTCATCTAACCTGAGGGGTGACTGGAAAAGAAGGTTTTTTGTCCTTGATAGTCGCGGAATGCTATACTACTACCGTAAGGAGTGTAGCAAACCATCTAGCTCTGGACCACGAACTTCAGGTCAGAGGAATAGTTCAGAACTGGGATCTGGATTGCTAAGCCGCTGGCTATCATCACATTATCATGGTGGCATGCATGATGAGAAATCTGTTGCGCATCATACTGTGAATTTGCTGACTGCAACGATCAAAGTTGATGCTGACCAGTCCGATTTACGGTTTTGCTTCAGGATTATCTCTCCAACCAAAAATTATACTTTACAGGCAGAAAGTGCTTTGGACCAAATGGATTGGATTGAGAAAATAACAGGAGTCATTGCTTCGCTACTAAGTTCTCAAACTCCTGAAAGGTGTCTTTCTGCTGCTCCTATGGGAAGTCTTCATCGATCAGCAAGTGAGAGTAGTTCTGTTGAAAGTTCTGAATTTGATCATACTGCAAATGAAGAGAACATTGCTGACAGATGCCTTACTGCTGTGCATCATGACCGCTCTTTCAAAGGCTCACTGCAACAACGATCATTTTTAAAGGCTGAGAAGCCAATTGATATTTTGCGGAGGGTTGGTGGCAATGACAAATGCGCTGATTGTGGCGCCCCTGAACCTGATTGGGCTTCCCTAAATCTCGGGGTACTTGTCTGTATTGAATGTTCAGGTGTTCACCGCAACCTTGGTGTCCACATATCAAAGGTAAGGTCGCTTACACTTGATGTCAAGGTGTGGGAACCCTCAGTTATATCACTATTTCAATCTCTGGGTAATACCTTCGCGAATTCTGTATGGGAAGAGTTATTGCGATCAAAAGGTGCTTTTCATGTTGATCTCCCTACATCAAGCTCACTGAAGGTTGATAAGCCCCAGCAGCTTTTTATTAGCAAGCCTAGTGCTGCTGATTCAATAGCAATAAAGGAAAAGTTCATTCATGCAAAGTATGCAGAAAAGCATTTTGTTCGGAAGCCAAAAGACAGTCAACATCTTCGGTTATTGGCTCAACAAATATGGGAAGGTGTCCGCAACAACGATAAAAAAGCTGTATATCGATACATTGTTAACTTTGAAGCAGATGTTAATGCTGTATATGAGCTGGCATGTTCAAGTTCCTCATTGACCCTTGCGAAAGTAATGCTGTTACCAGAGCAGACGAGCCATGGACAAAACCCTAGCCGTTGGACTGGGGACTTCTCATGCAAGTCATCTGAGAGCTCGTCAAGTGTATCTGCTGAAAATGACTTACTGAGCATGGAGGAACTAGATGGCTGCTCCTTGCTCCACCTTGCCTGTGAATTTTCTGACATAGGCATGTTGGAGCTACTCCTGCAGTATGGTGCCAATATTAACGCATCCGATTCAAGAGGTCAGATGCCACTTCACCGTTGTATCTTGAAAGGCAAAGCATCTGTGGCTAGATTGCTTCTCATGAGGGGTGCGGATCCGCAGGCTGTGAATGGGGAAGGTAAAACCCCTCTTGATATTGCCAAGGAGTCAAACTTTGATGATCCTGAGGTACTTGCCTTATTGTCAGACTCCAGGGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_85992.p1 GENE.S_Transcript_85992~~S_Transcript_85992.p1 ORF type:complete len:832 (+),score=164.02,BAR_3|PF16746.1|5.2e-40,ArfGap|PF01412.14|8.8e+03,ArfGap|PF01412.14|5.9e-34,Ank_5|PF13857.2|1.3e+04,Ank_5|PF13857.2|4.1e-06,Ank_5|PF13857.2|1.6e-11,Ank_2|PF12796.3|1.4e-07,Ank_2|PF12796.3|8.1e-09,BAR|PF03114.14|5.3e-15,Ank_4|PF13637.2|5.3e+03,Ank_4|PF13637.2|8.8e-10,Ank_4|PF13637.2|0.00047,PH|PF00169.25|4.8e-12,Ank|PF00023.26|1.8e-05,Ank|PF00023.26|0.0088,Ank|PF00023.26|1.2e+03,Ank_3|PF13606.2|7.5e+03,Ank_3|PF13606.2|1.6e+04,Ank_3|PF13606.2|0.0062,Ank_3|PF13606.2|0.64 S_Transcript_85992:147-2642(+)
MHFGKLDDSPMFRQQLQCLEESAESLRDRCQKFYKGSRKYTEGLGEAYDGDIAFASALETFGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQFVNIDLHDVKEARKRFDKASLAYDQAREKFLSLRKGTKSDVAAILEEELHQARSTFEQARFNLVTTLSNIEAKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMGPYINQVLTYAQQSRERSNYEQAALNERMQEYKRQIDRESRWCSNGSNGSPNGDGIQAIGRSSHKTIEAVMQSAAKGKVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKECSKPSSSGPRTSGQRNSSELGSGLLSRWLSSHYHGGMHDEKSVAHHTVNLLTATIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQTPERCLSAAPMGSLHRSASESSSVESSEFDHTANEENIADRCLTAVHHDRSFKGSLQQRSFLKAEKPIDILRRVGGNDKCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVISLFQSLGNTFANSVWEELLRSKGAFHVDLPTSSSLKVDKPQQLFISKPSAADSIAIKEKFIHAKYAEKHFVRKPKDSQHLRLLAQQIWEGVRNNDKKAVYRYIVNFEADVNAVYELACSSSSLTLAKVMLLPEQTSHGQNPSRWTGDFSCKSSESSSSVSAENDLLSMEELDGCSLLHLACEFSDIGMLELLLQYGANINASDSRGQMPLHRCILKGKASVARLLLMRGADPQAVNGEGKTPLDIAKESNFDDPEVLALLSDSRA*

Click here to download the sequence:
Link to NCBI Protein BLAST