Transcript Information: S_Transcript_86055.p1


Annotated TAIR IDAT5G47940.1
Annotated Gene Nameunknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19409407-19411893 | Reverse length=749
E-Value3.8E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9062050428602
Replicate 22.8965870952811
Replicate 32.5570910152722
Condition 2: 8 Hour
Replicate 14.1080813248956
Replicate 23.8430169442475
Replicate 34.0800886213216
Condition 3: 24 Hour
Replicate 12.6803538025269
Replicate 22.4193271253279
Replicate 32.2591524436484


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86055.p1 GENE.S_Transcript_86055~~S_Transcript_86055.p1 ORF type:complete len:815 (+),score=179.15,DUF4506|PF14958.2|0.00056,DUF4506|PF14958.2|23,DUF4506|PF14958.2|4e+03 S_Transcript_86055:191-2635(+)
ATGGCAACCGAAAACCTAAGCCCTTCACTGAAATCGCCGGCGACGAAATCCTCATCTTGGCCAATCGTTCGCGGTTCCGTCGACGATGCTGTCACCTTTGAATCTTCCATCGACGTTGATAATGATGAAGATCTTGATACTCAAGATTATCAAAATGATAATGATGATCAAGTACTCTCTAAGCCTAATCTTAAACCCCCTCTTGTCCTGCGCCGTCCCTCACCTGATTCTGCCCCTTGCGAGATCACTATTGTTTTCAAACAACTTCATGAAATCAGGCAGTTCTATGTACGAAGTACTGCTAGAGTCTACGAGATATACTATGCAACTAATGATAAGGGTGATGATGAGTATTTATGTACTGTTCGCTGTGGGGTGGCTGTAAAAAATGAAGATCTCCAAGAGGATGATGCTATAGGATCTTTGTCTGCCAGTTGTAGTGGCTCCAACAGATGTGTGGAGGAAGGGCATTCCAAAACTGAAAGTGGAAGCAGCACTAGTGAAGATGGGGGGGTGGACGTGAAAGTCTCTGATTCCTCTGGGCTTTATCATAGAGATCAAATTCTGCCAAAGGAGCAGGAGGGATTCATGGAACAATGCGATCAGGATCTTTTTGAGGCTACTGCAGAGATTTCTGATGCTGATCCTGTCCTGTCTGTTACTCTTCGCTTGCTATCTATTCAAAGTGGAGATTACATATATATTGATGAAATCTATGTGTTCGCTGATCCTGTTGTTTTATCAGCTGATACGGACTCTTCAGAAAAGACTCTTGGGAACTCATCTGGTAGTGCTTTGATGTCAATGCTCGTTCCTACACTTCTTCAGATGTCGAAATCTCGAGTGAACCAAATCCAAAAACATAATCATTCTGCTGCAGGAGAAAGAATAAAGCACCAAAATCCTGAGCACGAGTCAACTGGTGCACCCACTCATTCTAACGCATTTTGCTTGGAAGGAAAGGAAAGCACCCTGGCTAATGGGGAATCTTTAAACATGTCAGAATCAGAGGTTCCTTTACAAACACCAGATCCCCAAAGAGCCCCTTATTCTAGTAATAGAGATATTCCTTGCAGTCACATGCAGAGGTCGCTGGATGAACTTATTTCTCGAGTGGCTAGAATTGAACACTTCTGTTTAAGATTTGAGGAAAACTTGCTAAAGCCAATTACGAGTATGGAAGCAAGGCTCGAAAGGGTAGAACAACAACTGGAATCATTTGTCAAAACCTCCCAATTTTCAACCACAGCAGGCTATAGGATTTCTGCTCCTGACTTCTCATGCAATGATACTGAAGTTAATAACATTTGCACTGATGGAAATGATTATCTTGGAATTGGATTGGTTGATAATAATATTCATCATGAAGAAAATCATGAAGAACTACCAAGCCCACCGTCAAATGTGTCTTTATCTGCTAATAATCATGTTCGATGCCTTGATTTGCCTTCATCCACCTGTGTGTCTCAGTCGCTTCCAAGCCTAGTCGTCACTGCACCTGACTTTTTAAATGTAGACGATGAGGAAGAGAATGACACTGCTGAAGCAGTAAATGACTTGCAGAATGATAGCCCAAAGAAATCGTTGTCAATCGATGATGCTTTAGCATCTGCCCTTTCTGGTTTTTTGTTGTCAACTTCAACTAATTCAACAAAATGTATTGATAAGGTTGAGGAAGAAGATGCAGATCATCCTCCTTTTGTAAAAGGAAGCAGTAACGTATTGCTGCTCCAATCTGATGAACCTCAACTCCCGTCAGAACCTATCAATGTAGATAGCGAAGCTGCTGGCATTTCCTGCAAGGCTTTGGTTGTATCAAAGCAAGAGTCTCCCACTGTAGATAACTGTTCTAAGGAAATAGTTGAAGCTGTTGACAAACAAGACCATGATTTTGAAGAAGAGGTCAATAAACAGATCGAGAGATCCTCTGTTGATAATGTATCTTGTCTTGACAGAGGTGAAAGGGAAGATAGTGGTCTTATTGCAGAAATTAGGTTCAACGAGTTTGAGGATAACCTGAATCAAACTTTTGTTTCTTGTTACTCTGACAGTAGCAAGGAGGGTGCTGTAGATAACTCTGATGTACTGCAGAACATTCTCAAGTTACCTAGCCCTAGAACGATGGATTTTGAAATTCCCATACTGGATGTAAAGTTCTTGTCACTGGAGGATTCCTCTGCAAAGTCTCCTCTAGAAGCCCTTCTAATTGATATGCCTGAATTCCAGAGTGATGTTCTGTGTTTGAAAGAAAACAATGAATGTTCTTTGAGCGAGCAAAATGGTTTACTTATGATTGAGAATGAAGAATCAACAATTTCGGAAGCTAACAATGATCAGTTCTGTTTGGATAGTTGTGCCTCTGGCTGCATGCCTCTAAATACAGAGAAAGAACTCTATGATCCTCTTGAATTTAGCAGCCAAGATATGTCTGCAAGTCTGATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86055.p1 GENE.S_Transcript_86055~~S_Transcript_86055.p1 ORF type:complete len:815 (+),score=179.15,DUF4506|PF14958.2|0.00056,DUF4506|PF14958.2|23,DUF4506|PF14958.2|4e+03 S_Transcript_86055:191-2635(+)
MATENLSPSLKSPATKSSSWPIVRGSVDDAVTFESSIDVDNDEDLDTQDYQNDNDDQVLSKPNLKPPLVLRRPSPDSAPCEITIVFKQLHEIRQFYVRSTARVYEIYYATNDKGDDEYLCTVRCGVAVKNEDLQEDDAIGSLSASCSGSNRCVEEGHSKTESGSSTSEDGGVDVKVSDSSGLYHRDQILPKEQEGFMEQCDQDLFEATAEISDADPVLSVTLRLLSIQSGDYIYIDEIYVFADPVVLSADTDSSEKTLGNSSGSALMSMLVPTLLQMSKSRVNQIQKHNHSAAGERIKHQNPEHESTGAPTHSNAFCLEGKESTLANGESLNMSESEVPLQTPDPQRAPYSSNRDIPCSHMQRSLDELISRVARIEHFCLRFEENLLKPITSMEARLERVEQQLESFVKTSQFSTTAGYRISAPDFSCNDTEVNNICTDGNDYLGIGLVDNNIHHEENHEELPSPPSNVSLSANNHVRCLDLPSSTCVSQSLPSLVVTAPDFLNVDDEEENDTAEAVNDLQNDSPKKSLSIDDALASALSGFLLSTSTNSTKCIDKVEEEDADHPPFVKGSSNVLLLQSDEPQLPSEPINVDSEAAGISCKALVVSKQESPTVDNCSKEIVEAVDKQDHDFEEEVNKQIERSSVDNVSCLDRGEREDSGLIAEIRFNEFEDNLNQTFVSCYSDSSKEGAVDNSDVLQNILKLPSPRTMDFEIPILDVKFLSLEDSSAKSPLEALLIDMPEFQSDVLCLKENNECSLSEQNGLLMIENEESTISEANNDQFCLDSCASGCMPLNTEKELYDPLEFSSQDMSASLI*

Click here to download the sequence:
Link to NCBI Protein BLAST