Transcript Information: S_Transcript_86087.p1


Annotated TAIR IDAT5G39900.1
Annotated Gene NameSmall GTP-binding protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15976719-15978925 | Reverse length=663
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.48213797105
Replicate 26.6088234983176
Replicate 36.1382782729079
Condition 2: 8 Hour
Replicate 111.259547988925
Replicate 212.015138074286
Replicate 312.28644166036
Condition 3: 24 Hour
Replicate 15.651248225252
Replicate 26.1031141612554
Replicate 35.4183514455771


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86087.p1 GENE.S_Transcript_86087~~S_Transcript_86087.p1 ORF type:complete len:661 (+),score=133.01,GTP_EFTU|PF00009.23|2.8e-51,LepA_C|PF06421.8|1.9e-49,EFG_C|PF00679.20|5.1e-23,GTP_EFTU_D2|PF03144.21|2.1e-06 S_Transcript_86087:132-2114(+)
ATGGGGTCATTCAGTCGACTCTCAAAGACCCGAAAATTTATCAGACAAGTTCACAACCTAAACTCATTAGCCCCATTACCATCAGAGAGTGGTTTGAACTTGACCCATTCATTTTGCTCTCAATCTCGCAAGAAAGATAATGATAATATAGATTTGAGCCAATTCCCACCTGAGAGAATCCGTAACTTTTCCATTATTGCCCATGTGGATCATGGCAAGTCTACTCTTGCTGACAGACTCTTGGAGCTCACTGGAACTATCAAGAAAGGTCATGGTCAACCTCAGTATCTTGATAAACTCCAGGTGGAGAGAGAAAGAGGGATAACTGTTAAGGCACAGACAGCTACTATGTTCCACAAGTACATCTCTCATGTTGCAAATCCAGAAGGCATGGCAGCATACTTACTCAATTTGATAGATACACCAGGCCATGTTGATTTTAGCTATGAAGTATCAAGATCGTTAGCTGCTTGCCAAGGAGCTCTTCTAGTAGTTGATGCTGCTCAAGGTGTTCAGGCACAAACTGTTGCCAATTTTTATCTTGCTTTTGAGTCAAACCTGACCATTATCCCAGTCATAAACAAAATTGATCAGCCAACTGCTGATCCTGATCGTGTTAAGGCGCAACTGAAATCAATGTTTGATCTTGATCCAAGAGATGCCCTTCTCACATCTGCTAAGACAGGTCAAGGTCTTGAGCACGTCCTTCCTGCCGTGATACAGCGAATACCTCCTCCCCCTGGGAAGATTGATTTGCCATTACGTATGCTCTTATTAGATTCATATTATGATGAATACAAAGGAGTTATATGCCATGTTGCTATTGTTGATGGAACATTGCGCAAAGGTGACAAAATTTCATCTGTGGCAACTAGCCAAACTTATGAAGTTTCAGATGTTGGAATCATGCATCCTGAGCTTGTGGCAACTGGGGTCCTTTTTACGGGACAAGTGGGGTATGTGGTCAGTGGCATGCGTTCAACCAAAGAGGCACGGGTTGGTGATACCCTGTATAATGTACGTAGTGTTGTGGAGCCCCTTCCAGGTTTCAAGCGTGCAAAACATATGGTTTTCTCTGGTCTGTATCCAGCTGATGGATCAGATTTTGAAGCACTTAATCATGCAATTGAGAGGTTGACATGCAATGATGCCAGTGTACTGGTTACCAAAGAAACGAGCACAGCACTTGGTCTAGGTTTCAGGTGTGGTTTTTTAGGTTTACTCCATATGGATGTTTTCCATCAACGTCTTGAGCAGGAATATGGAGCTCGCATCATATCTACTGTTCCAACTGTGCCATATATATTTCAATATTCTGATGGAAGCAAAGTTGAAGTTCAAAATCCCGCTTCTTTGCCATCGAATCCAAAGAAACGAGTTACGGCTTGCTGGGAACCTACAGTTGTAGCAACCATTATTATTCCTAGTGAGTACGTGGGACCTGTAATGACTCTTTGTTCTGATCGAAGGGGGGAGCAGCTGGAGTACTCTTTCATAGATAGTCAAAGGGTATTCATGAAGTACCGGTTACCTTTACGGGAAATTGTTGTTGACTTTTACGATCAATTAAAAAGTATTACTTCAGGATATGCTTCTTTCGACTATGAAGACTCAGAATATCAATCCTCTGATTTGGTGAAACTGGATATCCTTTTGAATGGACAACCAGTGGATGCAATGGCAACTATTGTTCATAATTTGAAGGCACAACGTGTTGGTCGTCAACTGGTTGAGAAGTTGAAACAAGTCATAGACAGGCAAATGTTTGAAGTGACAATTCAAGCTGCGATTGGATCTAAGGTTATTGCAAGGGAGACTATTTCTGCGATGAGAAAGAATGTGCTTGCTAAATGTTATGGTGGTGATGTTACACGAAAGAAGAAGCTTTTGGAGAAGCAAAAGGAAGGAAAGAAGCGGATGAAACGGGTTGGTTCTGTTGATGTACCACAGGAAGCATTTCATGAGCTGTTGAAGGTTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86087.p1 GENE.S_Transcript_86087~~S_Transcript_86087.p1 ORF type:complete len:661 (+),score=133.01,GTP_EFTU|PF00009.23|2.8e-51,LepA_C|PF06421.8|1.9e-49,EFG_C|PF00679.20|5.1e-23,GTP_EFTU_D2|PF03144.21|2.1e-06 S_Transcript_86087:132-2114(+)
MGSFSRLSKTRKFIRQVHNLNSLAPLPSESGLNLTHSFCSQSRKKDNDNIDLSQFPPERIRNFSIIAHVDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFHKYISHVANPEGMAAYLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQGVQAQTVANFYLAFESNLTIIPVINKIDQPTADPDRVKAQLKSMFDLDPRDALLTSAKTGQGLEHVLPAVIQRIPPPPGKIDLPLRMLLLDSYYDEYKGVICHVAIVDGTLRKGDKISSVATSQTYEVSDVGIMHPELVATGVLFTGQVGYVVSGMRSTKEARVGDTLYNVRSVVEPLPGFKRAKHMVFSGLYPADGSDFEALNHAIERLTCNDASVLVTKETSTALGLGFRCGFLGLLHMDVFHQRLEQEYGARIISTVPTVPYIFQYSDGSKVEVQNPASLPSNPKKRVTACWEPTVVATIIIPSEYVGPVMTLCSDRRGEQLEYSFIDSQRVFMKYRLPLREIVVDFYDQLKSITSGYASFDYEDSEYQSSDLVKLDILLNGQPVDAMATIVHNLKAQRVGRQLVEKLKQVIDRQMFEVTIQAAIGSKVIARETISAMRKNVLAKCYGGDVTRKKKLLEKQKEGKKRMKRVGSVDVPQEAFHELLKVS*

Click here to download the sequence:
Link to NCBI Protein BLAST