Transcript Information: S_Transcript_86098.p1


Annotated TAIR IDAT1G55900.1
Annotated Gene NameHaloacid dehalogenase-like hydrolase (HAD) superfamily protein
Annotated Gene Symbol(s)TIM50, emb1860
Annotation TypeHomolog
Chromosome Positionchr1:20903163-20905420 | Forward length=376
E-Value3E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.2796003842784
Replicate 29.2541145088465
Replicate 37.8381628355302
Condition 2: 8 Hour
Replicate 112.439811018328
Replicate 210.564484079871
Replicate 312.138190997281
Condition 3: 24 Hour
Replicate 18.6772731643194
Replicate 28.1841541803477
Replicate 35.7450212256098


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86098.p1 GENE.S_Transcript_86098~~S_Transcript_86098.p1 ORF type:complete len:360 (+),score=37.70,NIF|PF03031.14|1.6e+03,NIF|PF03031.14|4.5e-31 S_Transcript_86098:273-1352(+)
ATGGGTTTACGAGCAGCTATGATCCGATCACGTCAGCTACTCGGATCCGGAACCCGTCAATCCAAACAATCTCTCTCCACCACCACCACCTCCGCCACCGGATCCCAACACTCCGATTTCTCTTCTTCTTCTTCGGCTTCATCGTTGCCGTCCAATTCAAGTGCCGCTAATCCGACGACCAGGAAGCTCCCTCTTTTTCTCAAGGCAGGTCTCTTCGGCGTTTTCGCCGGTGCTCTTGGCGCCGCTTACGCTACCTGTGCATACACCACCAACGAAATGGATGAGAAGACAAAGGCCTTTCGATCATCTATCAATCATTTCGTGGTGGACTCTGGGCCTACAAATGACAAACTTAAACCTCTGTACTCTGCTGTAATGACAGCTCCTGCAAAAGCTGTTGATCTTTACCTTCATGTGAGGAGGTCAATTGAAGAACGTCTGCAGGAATTCGCTGAACCTATGTCTGATAAACTTCTACCGGATATGGAGCCCGTCTATCAACAGATGGGCGTCCTCACGCTTGTTCTGGATTTACGAGAGACTTTAATTCATAATGAGTGGACGCGTGAGACAGGTTGGGCAACTTTTAAAAGACCAGGATTGGATGCATTCTTGGAGCAATTGTCTCAAATTTTTGAGATTGTTGTTTACACCGATGAGACGTTTGTTGATCTTCAGATACAGGAGAAGTTAAATAAAAAAGGTGTCTTCTACTTTCTAACAAGGCCTCACACTAAATACCGGGACGGAAAGCATTACAGGGACATCTCCAAGTTAAATAGAAATCCGTCAAAAGTTCTTTATGTAAGTGGACATGCACTAGAAACATGCCTTCAGCCTGAAAATTGTGTTCCTATCAAACCTTGGAGAAAAGAAGTAGATGATACGACATTGATTGACCTCATTCCGTTTCTTGAATTTGTTGGTATGCATAGACCAGCTGACATAAGAACGGTTTTGGCTTCGTACCATGGAAAGGATATTCCCAGTGAATTCATTGCACGTTCCAGAGAGCATCAAAGGCTCACCATGGAAAAGAAACCGAAGGCCTTGCGTTGGGGGCGCAGTAGCTGGAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86098.p1 GENE.S_Transcript_86098~~S_Transcript_86098.p1 ORF type:complete len:360 (+),score=37.70,NIF|PF03031.14|1.6e+03,NIF|PF03031.14|4.5e-31 S_Transcript_86098:273-1352(+)
MGLRAAMIRSRQLLGSGTRQSKQSLSTTTTSATGSQHSDFSSSSSASSLPSNSSAANPTTRKLPLFLKAGLFGVFAGALGAAYATCAYTTNEMDEKTKAFRSSINHFVVDSGPTNDKLKPLYSAVMTAPAKAVDLYLHVRRSIEERLQEFAEPMSDKLLPDMEPVYQQMGVLTLVLDLRETLIHNEWTRETGWATFKRPGLDAFLEQLSQIFEIVVYTDETFVDLQIQEKLNKKGVFYFLTRPHTKYRDGKHYRDISKLNRNPSKVLYVSGHALETCLQPENCVPIKPWRKEVDDTTLIDLIPFLEFVGMHRPADIRTVLASYHGKDIPSEFIARSREHQRLTMEKKPKALRWGRSSWN*

Click here to download the sequence:
Link to NCBI Protein BLAST