Transcript Information: S_Transcript_86105.p1


Annotated TAIR IDAT5G38730.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15510901-15512691 | Forward length=596
E-Value4.6E-220
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0338604234427
Replicate 24.9945291321146
Replicate 35.0100346053876
Condition 2: 8 Hour
Replicate 15.6671804976633
Replicate 26.6058608188169
Replicate 36.1681684998666
Condition 3: 24 Hour
Replicate 16.6652695689805
Replicate 25.4874976848243
Replicate 35.2132178396401


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86105.p1 GENE.S_Transcript_86105~~S_Transcript_86105.p1 ORF type:complete len:508 (+),score=92.24,PPR_2|PF13041.2|1.3e+03,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|2e-10,PPR_2|PF13041.2|4.9e-14,PPR_2|PF13041.2|2.2e-15,PPR_2|PF13041.2|2.7e-06,PPR_2|PF13041.2|2.3e-15,PPR_2|PF13041.2|1.2e-16,PPR_2|PF13041.2|2.3e-15,PPR_2|PF13041.2|5.5e-08,PPR_2|PF13041.2|3.6e-05,PPR_2|PF13041.2|0.24,PPR_1|PF12854.3|82,PPR_1|PF12854.3|9.1e+03,PPR_1|PF12854.3|4.9e-13,PPR_1|PF12854.3|2.9e-05,PPR_1|PF12854.3|4.7e-10,PPR_1|PF12854.3|1.8e-12,PPR_1|PF12854.3|1.3e-10,PPR_1|PF12854.3|1.3e-09,PPR_1|PF12854.3|3.8e-06,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|0.026,PPR_1|PF12854.3|0.24,PPR|PF01535.16|5.1e+03,PPR|PF01535.16|15,PPR|PF01535.16|0.16,PPR|PF01535.16|2.1e-09,PPR|PF01535.16|3.5e-07,PPR|PF01535.16|1.2e-05,PPR|PF01535.16|2.8e-06,PPR|PF01535.16|5.5e-06,PPR|PF01535.16|7e-07,PPR|PF01535.16|0.00014,PPR|PF01535.16|41,PPR|PF01535.16|0.00049,PPR|PF01535.16|0.017,PPR_3|PF13812.2|5.9e+03,PPR_3|PF13812.2|17,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|5.8e-06,PPR_3|PF13812.2|8.1e-05,PPR_3|PF13812.2|0.66,PPR_3|PF13812.2|0.00089,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|0.017,PPR_3|PF13812.2|3.3,PPR_3|PF13812.2|5.3e+03,PPR_3|PF13812.2|11,PPR_3|PF13812.2|0.039,MRP-S27|PF10037.5|0.0043,MRP-S27|PF10037.5|1.2e+03,MRP-S27|PF10037.5|2.4,MRP-S27|PF10037.5|2.9 S_Transcript_86105:384-1907(+)
ATGATTCACTTCCTTACTAAACAGAAGCAGTTCAAAGTTGCTCAGAACTTGCTGAATAAGATTGCTCTTAAGGATTATTTATCCTCACCCACTGTTTTGAATGCACTCCTTGGGACCCACAATGACCCAGAATTCAATTCTCAGATTTTGAGTTGGTTGGTGATATTTTATGCTGATTCTAGGATGACCCAAGATGCAATTCAGGTGTTTGAGTATATGAAAGTCAATAGGTTTAAGCCTCATTTACCTGCTTGTACTGTGCTTTTGAATTCTCTGATCAAGGCTGGGTTGACTGCTACCATGTGGAAGTTGTATAGGAAGATGTTGAGTCTTGGGGTGTCGCCGAATCTTTATGTGTATAATGTGTTGATTCATGGTTGTTGTAAGTCGGGTGATGTGGAGAAAGCGGAAGAATTGTTGAGTGAGATGGAAATGAGGTACATATTCCCTGATCTCTTCACTTACAACACGCTGATTTCATTGTATGTGAAGAAAGGTAAGCACTATGAAGCTATGTCGGTCCAAGATAGGATGGAAAAAGCTGGTGTGGCTCCGGATATTGTGACTTACAATAGTCTTGTATATGGATATTGTAGAGAAGCTAGGATGAAGGAGGCACTAATACTTTTTAGTGAAATTAAAGGTGCCAGTCCTAATGTTGTGACTTATGCCACTTTGATTGATGGATACTGTCGAGCTAATGACCTGAATGAAGCTTTGAGATTGCAGCAAGTGATGGAGTCTAAAGGTCTCTATCCTGGGGTTGTTACTTATAATTCGATCCTCCGTAAGCTATGCAAGGAAGGTAGGATAAGGGATGCAAACAAGCTCCTAAATGAGATGAGTGCAAAGAAGGTGGAACCTGACAACATCACGTGCAATACACTGATTAATGCTTATTGTAAAATAGGAGATATGCGGTCTGCTTTGAGGGTAAAAAATAAGATGTTAGATGCTGGGTTGAAGATTGATCAGTTTACTTTCAAGGCACTGATACATGGTTTTTGCAATGCCCGGGAGATGGATAATGCAAAGGAGCTCATTTTTGAAATGCTTAATGTTGGATTTTCTCCAAGTTTTTGCACCTATTCATGGATTGTTGACGGTTACTGTTGCCAGGGTAATGAGGAAGCAATAGTACGATTAGCAGATGAGCTTGCAGGCAGAGGATTTTTTGTTGATATTTCAGTGTATCGGGCTCTGATTAGAATCCTTTGCAAGAAGGATAGGATTGAATTTTCTAGAAGGTTATTTAATTGTATGGAAGAGAAAGGTATCAAGGGAGACAGTCTTATATACAGTAGCTTGGCATTTGCTTACTTTAAAGCAGGGAAGGCAAGGCTGGCTTCAGATTTACTGGATGAGATGTACAAGAGGAGGTTGAACATAACCCTGAAAATTTATAGGTGTTTCAGTGCTTCAAATGCTGGTGAGCACAACATTTTAAGGCTCTTTTGGGATCACTTGGGGCAGAGAAATCTTATCTCAAAGAATGTTTACAAGCATATCCAAGAGCTAGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86105.p1 GENE.S_Transcript_86105~~S_Transcript_86105.p1 ORF type:complete len:508 (+),score=92.24,PPR_2|PF13041.2|1.3e+03,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|2e-10,PPR_2|PF13041.2|4.9e-14,PPR_2|PF13041.2|2.2e-15,PPR_2|PF13041.2|2.7e-06,PPR_2|PF13041.2|2.3e-15,PPR_2|PF13041.2|1.2e-16,PPR_2|PF13041.2|2.3e-15,PPR_2|PF13041.2|5.5e-08,PPR_2|PF13041.2|3.6e-05,PPR_2|PF13041.2|0.24,PPR_1|PF12854.3|82,PPR_1|PF12854.3|9.1e+03,PPR_1|PF12854.3|4.9e-13,PPR_1|PF12854.3|2.9e-05,PPR_1|PF12854.3|4.7e-10,PPR_1|PF12854.3|1.8e-12,PPR_1|PF12854.3|1.3e-10,PPR_1|PF12854.3|1.3e-09,PPR_1|PF12854.3|3.8e-06,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|0.026,PPR_1|PF12854.3|0.24,PPR|PF01535.16|5.1e+03,PPR|PF01535.16|15,PPR|PF01535.16|0.16,PPR|PF01535.16|2.1e-09,PPR|PF01535.16|3.5e-07,PPR|PF01535.16|1.2e-05,PPR|PF01535.16|2.8e-06,PPR|PF01535.16|5.5e-06,PPR|PF01535.16|7e-07,PPR|PF01535.16|0.00014,PPR|PF01535.16|41,PPR|PF01535.16|0.00049,PPR|PF01535.16|0.017,PPR_3|PF13812.2|5.9e+03,PPR_3|PF13812.2|17,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|5.8e-06,PPR_3|PF13812.2|8.1e-05,PPR_3|PF13812.2|0.66,PPR_3|PF13812.2|0.00089,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|0.017,PPR_3|PF13812.2|3.3,PPR_3|PF13812.2|5.3e+03,PPR_3|PF13812.2|11,PPR_3|PF13812.2|0.039,MRP-S27|PF10037.5|0.0043,MRP-S27|PF10037.5|1.2e+03,MRP-S27|PF10037.5|2.4,MRP-S27|PF10037.5|2.9 S_Transcript_86105:384-1907(+)
MIHFLTKQKQFKVAQNLLNKIALKDYLSSPTVLNALLGTHNDPEFNSQILSWLVIFYADSRMTQDAIQVFEYMKVNRFKPHLPACTVLLNSLIKAGLTATMWKLYRKMLSLGVSPNLYVYNVLIHGCCKSGDVEKAEELLSEMEMRYIFPDLFTYNTLISLYVKKGKHYEAMSVQDRMEKAGVAPDIVTYNSLVYGYCREARMKEALILFSEIKGASPNVVTYATLIDGYCRANDLNEALRLQQVMESKGLYPGVVTYNSILRKLCKEGRIRDANKLLNEMSAKKVEPDNITCNTLINAYCKIGDMRSALRVKNKMLDAGLKIDQFTFKALIHGFCNAREMDNAKELIFEMLNVGFSPSFCTYSWIVDGYCCQGNEEAIVRLADELAGRGFFVDISVYRALIRILCKKDRIEFSRRLFNCMEEKGIKGDSLIYSSLAFAYFKAGKARLASDLLDEMYKRRLNITLKIYRCFSASNAGEHNILRLFWDHLGQRNLISKNVYKHIQELV*

Click here to download the sequence:
Link to NCBI Protein BLAST