Transcript Information: S_Transcript_86187.p1


Annotated TAIR IDAT5G46840.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19005651-19007609 | Forward length=501
E-Value1.4E-145
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.007889789894
Replicate 220.284215351343
Replicate 320.000280013886
Condition 2: 8 Hour
Replicate 120.465825640243
Replicate 220.310718630692
Replicate 317.347254096952
Condition 3: 24 Hour
Replicate 116.687646121414
Replicate 211.919163861649
Replicate 317.089024328227


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86187.p1 GENE.S_Transcript_86187~~S_Transcript_86187.p1 ORF type:complete len:521 (+),score=137.21,RRM_6|PF14259.2|4.5e-06,RRM_6|PF14259.2|4.5e-11,RRM_1|PF00076.18|5e-05,RRM_1|PF00076.18|33,RRM_1|PF00076.18|9.9e-11,RRM_7|PF16367.1|0.00086,RRM_7|PF16367.1|0.058,RRM_5|PF13893.2|5.9,RRM_5|PF13893.2|0.26,RRM_5|PF13893.2|0.6 S_Transcript_86187:181-1743(+)
ATGCAATTACAAACAAACAATGGCAAAGAAATCAAAGGACCCAAAACCCAAACCCAAACCCAAACCCGAAAACTTACAAGAACAAATACCTCAACTTCTCCTGTTTCCTCAAACATTTTCAGCAAACTCTTCGGCAATGAAACCCCACAAACCGGACCCTCCACCACCCTATTCTCCTCCGACAATCCCTTCCGTCGAAAACCAACCGATAACCAAACCCAACAAAATCCTAACCAAGATACCCACATCAAGAAAAACGAAAAAAGGCCAATTCTTGATGATGGGGTTTCACCAAAACCTTCAAAAGAACCCAAATTGTATGATGGGCAAGCCTTAAATATCCAAGCAGGAAATGGGTCATCGTCAAAATTTGATCTTGATGAAGGCAAGGTGAAAAAGAAGAAGAATAAGAGGAAAAGAGATGAGATTGAGAGGGAATATGAGGAGAAGAAATACGGTGTCGTTTTGGAAGGGGAGGAAGAGAAGAAGGAAGTGGTTGCTGCTGGGAAGAAGAGAAAGGAAGTTGATAACCCAGCTGAGTTGATGCTTTCTCAAGAAGAAGGGTATGATGATGAAAGTAAGCTCTTGAGGACTGTTTTTGTTGGCAATTTGCCTTTGAAGCTGAAGAAGAAGGTTTTGTTGAAGGAGTTTAGTCAGTTTGGGGAGGTTGAGTCCGTTCGGATTCGGTCCGTCCCTACTTTGGATAGTAAGAAGCCTAAGAAGGTTCAGATTCTCAATGGGAAGATCAACGAGGCCGCCGATAGTGTCCATGCTTACATTGTTTTTAAGACAGAACAATCTGCTGAAGCCTCCTTGGGCCATAACATGTCTGTGATTGGTGGGAATCATATCCGTGTTGATAGGGCGTGTCCACCTCGCAAGAAACTGAAAGAGGACGGTGCTTCAGCTCCTCTTTATAGTAACAAGAGGACCATTTTCGTGGGGAATTTGCCATTTGATGTCAAGGATGAAGAACTCTATCAGTTATTTTGTGGTATCAAACAGCTGGAATCAAGTGTTGAAGCTGTTCGAGTTATTAGAGACCCCCATACAAGTGTTGGGAAGGGGATTGCTTATGTCTTGTTCAAAACAAGGGAAGCTGCAAATTTCGCTTGTAAGAAACACAAGTTGAAGATCCGAGACCGTGAATTAAGGATATGTCATGCCAAGTCAGATTCCCAGTCGACTCCCTCAAAGAGGAAAAACCCATTCTCGGGTGAAAATACCCCTGCCAAGAAATTTTTGTCAGAGAGCCCCGGGAGCCGATATAAGGTGAATACTAGAGGTGATACCTCCTACCAAGGTTTACGGGCAAGCAAATCCAGTGAAAAGAAGAAAACCCCTTCAAGAAGAACTCCTACACCAGTGGCCGTCAAGTCTGGAACCAAGACCAAAGAAAAAGTTAAGCAGCGGACAGGAAAAAGACCAGCCGTAGCAGCCAGAAAGGCAAAGGCGGGTTTGCAAGGTGGGGGTGTTTCTAGCCAAGCAGGACAGAAGCGGAAGATGGATGCCAGAACTCCTTCTGGTTCAAACCAGAAGAAAAAATTTAAGAAATCCAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86187.p1 GENE.S_Transcript_86187~~S_Transcript_86187.p1 ORF type:complete len:521 (+),score=137.21,RRM_6|PF14259.2|4.5e-06,RRM_6|PF14259.2|4.5e-11,RRM_1|PF00076.18|5e-05,RRM_1|PF00076.18|33,RRM_1|PF00076.18|9.9e-11,RRM_7|PF16367.1|0.00086,RRM_7|PF16367.1|0.058,RRM_5|PF13893.2|5.9,RRM_5|PF13893.2|0.26,RRM_5|PF13893.2|0.6 S_Transcript_86187:181-1743(+)
MQLQTNNGKEIKGPKTQTQTQTRKLTRTNTSTSPVSSNIFSKLFGNETPQTGPSTTLFSSDNPFRRKPTDNQTQQNPNQDTHIKKNEKRPILDDGVSPKPSKEPKLYDGQALNIQAGNGSSSKFDLDEGKVKKKKNKRKRDEIEREYEEKKYGVVLEGEEEKKEVVAAGKKRKEVDNPAELMLSQEEGYDDESKLLRTVFVGNLPLKLKKKVLLKEFSQFGEVESVRIRSVPTLDSKKPKKVQILNGKINEAADSVHAYIVFKTEQSAEASLGHNMSVIGGNHIRVDRACPPRKKLKEDGASAPLYSNKRTIFVGNLPFDVKDEELYQLFCGIKQLESSVEAVRVIRDPHTSVGKGIAYVLFKTREAANFACKKHKLKIRDRELRICHAKSDSQSTPSKRKNPFSGENTPAKKFLSESPGSRYKVNTRGDTSYQGLRASKSSEKKKTPSRRTPTPVAVKSGTKTKEKVKQRTGKRPAVAARKAKAGLQGGGVSSQAGQKRKMDARTPSGSNQKKKFKKSK*

Click here to download the sequence:
Link to NCBI Protein BLAST