Transcript Information: S_Transcript_86219.p2


Annotated TAIR IDAT3G03560.1
Annotated Gene Nameunknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23490.1); Has 157 Blast hits to 146 proteins in 38 species: Archae - 3; Bacteria - 14; Metazoa - 8; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:853153-856486 | Reverse length=521
E-Value3.4E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.330650061759
Replicate 21.7650231646012
Replicate 31.475418886688
Condition 2: 8 Hour
Replicate 11.919285128542
Replicate 21.7897478911781
Replicate 30.42631695209963
Condition 3: 24 Hour
Replicate 10.87379533962377
Replicate 21.1331905788174
Replicate 32.5222044405116


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86219.p2 GENE.S_Transcript_86219~~S_Transcript_86219.p2 ORF type:5prime_partial len:100 (-),score=18.42 S_Transcript_86219:727-1026(-)
TTGTCTGATCATCATCATAAAGCTGAAGAGCACACAACAGCCCCCAATAGTATGTCACAGTATGGGCATGATGAGCATAATAGGGATCCAGGGTATGGGCATGATGATTATAATAGGGATCCAGGGCACTCCATAATTTATGACGAGGGCCCTGGAATAGAAGGCTTTCAAATTATTGGTGATGCTAAACCAGGAAACAAGCTTCTTGGGTGTGGTTACCCTGTACGAGGTACTTCTCTCTGCATGTTTCAGTGGGTTCGTCATCTCCCAGATGGCACCGGACACTACATTGAGGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86219.p2 GENE.S_Transcript_86219~~S_Transcript_86219.p2 ORF type:5prime_partial len:100 (-),score=18.42 S_Transcript_86219:727-1026(-)
LSDHHHKAEEHTTAPNSMSQYGHDEHNRDPGYGHDDYNRDPGHSIIYDEGPGIEGFQIIGDAKPGNKLLGCGYPVRGTSLCMFQWVRHLPDGTGHYIEA*

Click here to download the sequence:
Link to NCBI Protein BLAST