Transcript Information: S_Transcript_86224.p1


Annotated TAIR IDAT3G03560.1
Annotated Gene Nameunknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23490.1); Has 157 Blast hits to 146 proteins in 38 species: Archae - 3; Bacteria - 14; Metazoa - 8; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:853153-856486 | Reverse length=521
E-Value2.4E-112
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5256540097889
Replicate 22.4042783492164
Replicate 32.7979364571274
Condition 2: 8 Hour
Replicate 15.4224817259377
Replicate 24.2066723937947
Replicate 34.8279483891624
Condition 3: 24 Hour
Replicate 12.9406573929646
Replicate 23.2930324512641
Replicate 33.2335954365534


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86224.p1 GENE.S_Transcript_86224~~S_Transcript_86224.p1 ORF type:complete len:468 (+),score=89.51,SCAB-IgPH|PF16709.1|1.9e+03,SCAB-IgPH|PF16709.1|4.7e-06 S_Transcript_86224:474-1877(+)
ATGTCTGCTGATAAAAGTAGACCGCAGTTAAGCAGGCGTGATACTGGAAAATCTGCTTTATTGAATTTGAAAGGAGATGACAATTTAAACAATTCTGAGGAACAAAGGGCTATGGAACTTGTTTCACAAGCCAGGGCACAAGAACGCCAAATCTCCTTTCTCAAGTGGCAGATTAGCCAAGCTTATGTTAAGGAGATGCAGCTGTTGAATGAAAAATTTGCCCTAGAGAAGAAATATTCAGATCTACGGATGGCTATGGATGAGAAACAAAAGGAATCTATATCTTCAGCCTTGAAAGAAGTGGCCCACAGAAAAGGTGACATTGATGAAAACATAAGACTAACCAATGTTTTAAAGGATACAGAGGATGAAAGATATATTTTCATGACATCATTGCTTGGATTGTTGGCTGAGCATGGCATATGGCCCAACGTCGCAAATGCCTCTTCTATTTGTATGTCTTTGAAGGACCTATATGATCAATTGCAGTGGAAGATACAGGAGAAAACCAAGGAGTGGAGTTCTTTAACTGGGAATCATGCTATGGATCAGTACTATGGGGACAGCTCGCAACCCAGAAGCATAAATAGGGAAACAGCAATGTCTTTATCTGATCATCATCATAAAGCTGAAGAGTACACAACAGCCCCCACTAGTATGTCACAGTATGGGGATGATGAACATAATAGGGATCCAGGGTATGGGCATGATGATTATAATAGGGATCCAGGGCACTCCATAATTTATGACGAGGGCCCTGGAATAGAAGGCTTTCAAATTATTGGTGATGCTAAACCAGGAAACAAGCTTCTTGGGTGTGGTTACCCTGTACGAGGCACTTCTCTCTGCATGTTTCAGTGGGTTCGTCATCTCCCAGATGGCACCAGACACTACATTGAGGGTGCTACCAACCCAGATTATGTAGTAACAGCTGATGATGTTGATAAATATATTGCTGTTGAGTGCATACCAATGGACGAGAGTGGCCGTCAGGGGGATATAGTGAGACTCATTGCCAATGATCAGAGTAAAATAACTTGTGACCCAGAAATGCAAACAGAGATTGACACATATATCTCTAATGGTCAGGCGGCTTTTAACGTTTCGGTGCTGTTGGATTCACTCGAACATTGGGAGCCAGCAACATTTATTTTGAGAAGGTCAGGATATCAAGTTAAGATCAACAAGACCGAAACTGTCCATATTGCTGAGAAATTCTCGGACAACTTCTCGATAAAAGTTCCTGTTGGGTTTTCAATACAGTTTGTCTTGACATGTTCTGATGGAACTTCCCATCCTTTTAGCACATACGATGTTCGAATGCGTGATACTCTTGTGCTGACCATGAGAATGTTCCAAAGTAAGGCCCAGGATGACAGGAGAAAAGGAAAGCGACACTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86224.p1 GENE.S_Transcript_86224~~S_Transcript_86224.p1 ORF type:complete len:468 (+),score=89.51,SCAB-IgPH|PF16709.1|1.9e+03,SCAB-IgPH|PF16709.1|4.7e-06 S_Transcript_86224:474-1877(+)
MSADKSRPQLSRRDTGKSALLNLKGDDNLNNSEEQRAMELVSQARAQERQISFLKWQISQAYVKEMQLLNEKFALEKKYSDLRMAMDEKQKESISSALKEVAHRKGDIDENIRLTNVLKDTEDERYIFMTSLLGLLAEHGIWPNVANASSICMSLKDLYDQLQWKIQEKTKEWSSLTGNHAMDQYYGDSSQPRSINRETAMSLSDHHHKAEEYTTAPTSMSQYGDDEHNRDPGYGHDDYNRDPGHSIIYDEGPGIEGFQIIGDAKPGNKLLGCGYPVRGTSLCMFQWVRHLPDGTRHYIEGATNPDYVVTADDVDKYIAVECIPMDESGRQGDIVRLIANDQSKITCDPEMQTEIDTYISNGQAAFNVSVLLDSLEHWEPATFILRRSGYQVKINKTETVHIAEKFSDNFSIKVPVGFSIQFVLTCSDGTSHPFSTYDVRMRDTLVLTMRMFQSKAQDDRRKGKRHS*

Click here to download the sequence:
Link to NCBI Protein BLAST