Transcript Information: S_Transcript_86227.p1


Annotated TAIR IDAT3G03560.1
Annotated Gene Nameunknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23490.1); Has 157 Blast hits to 146 proteins in 38 species: Archae - 3; Bacteria - 14; Metazoa - 8; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:853153-856486 | Reverse length=521
E-Value8.3E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.93884210883042
Replicate 30.47087836809193
Condition 2: 8 Hour
Replicate 10.36298536710014
Replicate 21.3327909827922
Replicate 30
Condition 3: 24 Hour
Replicate 10.55774170614283
Replicate 20
Replicate 30.64396709119445


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86227.p1 GENE.S_Transcript_86227~~S_Transcript_86227.p1 ORF type:complete len:235 (+),score=47.16 S_Transcript_86227:730-1434(+)
ATGAGTTTGTATGGATATCAGGAGATGCAGCTGTTGAATGAAAAATTTGCCCTAGAGAAGAAATATTCAGATCTACGGATGGCTATGGATGAGAAACAAAAGGAATCTATATCTTCAGCCTTGAAAGAAGTGGCCCACAGAAAAGGTGACATTGATGAAAACATAAGACTAACCAATGTTTTAAAGGATACAGAGGATGAAAGATATATTTTCATGACATCATTGCTTGGATTGTTGGCTGAGCATGGCATATGGCCCAACGTCGCAAATGCCTCTTCTATTTGTATGTCTTTGAAGGACCTATATGATCAATTGCAGTGGAAGATACAGGAGAAAACCAAGGAGTGGAGTTCTTTAACTGGGAATCATGCTATGGATCAGTACTATGGGGACAGCTCGCAACCCAGAAGCATAAATAGGGAAACAGCAATGTCTTTATCTGATCATCATCATAAAGCTGAAGAGTACACAACAGCCCCCACTAGTATGTCACAGTATGGGGATGATGAACATAATAGGGATCCAGGGTATGGGCATGATGATTATAATAGGGATCCAGGGCACTCCATAATTTATGACGAGGGCCCTGGAATAGAAGGCTTTCAAATTATTGGTGATGCTAAACCAGGAAACAAGCTTCTTGGGTGTGGTTACCCTGTACGAGTGGGTTCGTCATCTCCCAGATGGCACCAGACACTACATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86227.p1 GENE.S_Transcript_86227~~S_Transcript_86227.p1 ORF type:complete len:235 (+),score=47.16 S_Transcript_86227:730-1434(+)
MSLYGYQEMQLLNEKFALEKKYSDLRMAMDEKQKESISSALKEVAHRKGDIDENIRLTNVLKDTEDERYIFMTSLLGLLAEHGIWPNVANASSICMSLKDLYDQLQWKIQEKTKEWSSLTGNHAMDQYYGDSSQPRSINRETAMSLSDHHHKAEEYTTAPTSMSQYGDDEHNRDPGYGHDDYNRDPGHSIIYDEGPGIEGFQIIGDAKPGNKLLGCGYPVRVGSSSPRWHQTLH*

Click here to download the sequence:
Link to NCBI Protein BLAST