Transcript Information: S_Transcript_86234.p1


Annotated TAIR IDAT5G62260.1
Annotated Gene NameAT hook motif DNA-binding family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25009331-25011348 | Forward length=404
E-Value3E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.326366597116
Replicate 27.0259478650419
Replicate 38.2882534185229
Condition 2: 8 Hour
Replicate 113.011026830394
Replicate 210.719844139869
Replicate 311.609524141999
Condition 3: 24 Hour
Replicate 16.6964970224143
Replicate 26.3404710957639
Replicate 36.4556423179761


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86234.p1 GENE.S_Transcript_86234~~S_Transcript_86234.p1 ORF type:complete len:336 (+),score=81.68,DUF296|PF03479.11|9.2e-31 S_Transcript_86234:540-1547(+)
ATGGAGGGTAAAGAAGAAATAGGTCATGGGGTAACAATGAAAGGGGATGAAGGTAGTCAAGGTTTCTGTGTGGCAGCTAGGGCTGAAAACCCTAGTCAACCAGGAGCTCCAACAATGGCAGCTGCCCCACAAACTACTAATATGGCTGCACCTTCTTCTGATATGAGGAAGAAGAGGGGCAGACCACGGAAATATGGCCCAGATGGTGCTGTGGCGGCCGCATTGTCGCCAATGCCGATTTCGGCTTCTATTCCTCTCACTGGTGACTTCTCTGGTTGGAAACAACCTAGAGCAAGGCACTATCAGTCTGTAAAGAAGGTGCATATAGTGGAGTTTGAAAATTCAGGTGATCGGCTTGCATGTCTTGTTGGTGCAAATTTCACACCGCATGTGATCACTGTAAAAACTGGGGAGGATGTTGCAATGAAGGTTCTATCATTTTCTCAGCAAGAGTCTCGTGCCATATGTGTTCTGTCTGCAAGTGGTTCAATCTCAAATGTAACCCTTCGTCAGCCTAATTCCTCTGGAGGCACTCTAACCTATGAGGGTCGTTTTGAGATACTTTCCTTGTCTGGATCATTTATGCCTACTGACAATGGCATAGTGAAGAGCAGATCTGGAGGCATGAGTGTATCACTGGCAGGTCCTGATGGTCGTGTCTTAGGCGGAGGACTGGCTGGTCTACTAGTTGCTGCTAGCCCTGTGCAGGTGGTAATCGGAAGTTTCTTGCCTGGTCACCATCAAGAACACAAGCCCAAGAAACAGAGGATGGAACCAGTAACACCTGCAGTTATGCCTGCTATCGTCAGCCCTGTCCAAGAAGGAGGTTATGGAGGACAGAAGGTAAATTTTGCATCACCACCCTCTTATCACACAGAAAACATGCCTTCTATGAACTCGACCCACGACACGAGAGACCTTGAAACTGACAATAACGTATCATCCCCTGACGGAGAATCTGATGATGACTGTGATGACGACGACTCACACTTGGAGATTTCCGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86234.p1 GENE.S_Transcript_86234~~S_Transcript_86234.p1 ORF type:complete len:336 (+),score=81.68,DUF296|PF03479.11|9.2e-31 S_Transcript_86234:540-1547(+)
MEGKEEIGHGVTMKGDEGSQGFCVAARAENPSQPGAPTMAAAPQTTNMAAPSSDMRKKRGRPRKYGPDGAVAAALSPMPISASIPLTGDFSGWKQPRARHYQSVKKVHIVEFENSGDRLACLVGANFTPHVITVKTGEDVAMKVLSFSQQESRAICVLSASGSISNVTLRQPNSSGGTLTYEGRFEILSLSGSFMPTDNGIVKSRSGGMSVSLAGPDGRVLGGGLAGLLVAASPVQVVIGSFLPGHHQEHKPKKQRMEPVTPAVMPAIVSPVQEGGYGGQKVNFASPPSYHTENMPSMNSTHDTRDLETDNNVSSPDGESDDDCDDDDSHLEISG*

Click here to download the sequence:
Link to NCBI Protein BLAST