Transcript Information: S_Transcript_86254.p1


Annotated TAIR IDAT1G69290.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:26047372-26049348 | Reverse length=658
E-Value7.1E-174
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8459494786448
Replicate 23.2929536653007
Replicate 34.4042354826509
Condition 2: 8 Hour
Replicate 16.6204196805428
Replicate 26.2774739466696
Replicate 35.9811632085619
Condition 3: 24 Hour
Replicate 13.3256389791651
Replicate 24.9386813285772
Replicate 35.0444088810232


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86254.p1 GENE.S_Transcript_86254~~S_Transcript_86254.p1 ORF type:5prime_partial len:335 (+),score=75.60,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|0.042,PPR|PF01535.16|1.2,PPR|PF01535.16|7.2,PPR|PF01535.16|57,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|0.029,PPR|PF01535.16|5.9e+02,PPR_2|PF13041.2|1.2e+03,PPR_2|PF13041.2|2,PPR_2|PF13041.2|0.0078,PPR_2|PF13041.2|0.061,PPR_2|PF13041.2|3.6e-12,PPR_2|PF13041.2|9.6,PPR_2|PF13041.2|4.3e+03,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|24,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|0.0053,PPR_3|PF13812.2|21,PPR_3|PF13812.2|4.3e-05,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|40,PPR_1|PF12854.3|52,PPR_1|PF12854.3|0.43,PPR_1|PF12854.3|36,PPR_1|PF12854.3|4.5e-08,PPR_1|PF12854.3|2.6 S_Transcript_86254:3-1007(+)
AGTGAGGAGGTTTACTGTGAAATGGTGAATGGATTTCTAACACATGGAAATATCAAGGATTTAGCTGCGCTGATTGTTGAAGCTCAATTGTTGGAACCTGAATCTGTCATCGCGGAAAAGTCTATTGGTTTTGGCATTATTAGTGCTTGTGTTAATCTCAGGATGTTGGATAAGGCTCATAGTATATTAGATGAGATGAACGCTCAGGGTGCTGCCGTTGGACTTGGGGTCTATTTGTCAATCTTAAGGGCCTACTGTAAAGAGCAGAGAACAGCTGAAGCTGCTCAATTGGTTGCTGAGATTAGTGGTTCTGGCCTCCAATTGGATGCTAGCCGTTATGATGCATTAATAGAAGCATCTATGTCGAGCCAGGATTTTCAGTCTGCTTTTTCATTGTATAGGGACATGAGGAATGCAAGAATTTATGAATTGAAAGGAAGCTACCTTACTATAATGACTGGATTAACTGAAAATAATCGTCCTGAATTGATGGCAGCCTTCTTGGATGAGGTTGTTGAGGATCCTCGCATTGAAGTGGGAACGCATGATTGGAATTCTATTATACATGCTTTCTGTAAGGCTGGTCGGCTAGAAGATGCTAGGAGGACTTTTAGGAGGATGGTCTTTCTGCAATTTCAACCTAATGAGCAGACATATTTGTCCTTGATCCATGGTTATGTATCTGCAGAAAAGTACTTCAATGTGTTGATGCTATGGAATGAGGTTAAAAAGCGAACACCAACTGGTGACTCAAATGGTTTTAAGTTAGATCAAACGCTGATTGATGCTTTCCTTTATGCTTTGGTAAAAGGAGGCTTCTTTGATGCTGTGATGCAAGTGGTGGACAAATCTCAAGAGTTGAAGATTTTTGTTGATAAATGGAGATACAAGCAAGCATTCATGGAGAGCCATAAGAAACTTAAAATATCTAAGCTGAGAAGAAGAAACTTCAGAAAAATGGAAGCCCTGATTGCATTCAAAAATTGGGCAGGCTTGAATGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86254.p1 GENE.S_Transcript_86254~~S_Transcript_86254.p1 ORF type:5prime_partial len:335 (+),score=75.60,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|0.042,PPR|PF01535.16|1.2,PPR|PF01535.16|7.2,PPR|PF01535.16|57,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|0.029,PPR|PF01535.16|5.9e+02,PPR_2|PF13041.2|1.2e+03,PPR_2|PF13041.2|2,PPR_2|PF13041.2|0.0078,PPR_2|PF13041.2|0.061,PPR_2|PF13041.2|3.6e-12,PPR_2|PF13041.2|9.6,PPR_2|PF13041.2|4.3e+03,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|24,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|0.0053,PPR_3|PF13812.2|21,PPR_3|PF13812.2|4.3e-05,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|40,PPR_1|PF12854.3|52,PPR_1|PF12854.3|0.43,PPR_1|PF12854.3|36,PPR_1|PF12854.3|4.5e-08,PPR_1|PF12854.3|2.6 S_Transcript_86254:3-1007(+)
SEEVYCEMVNGFLTHGNIKDLAALIVEAQLLEPESVIAEKSIGFGIISACVNLRMLDKAHSILDEMNAQGAAVGLGVYLSILRAYCKEQRTAEAAQLVAEISGSGLQLDASRYDALIEASMSSQDFQSAFSLYRDMRNARIYELKGSYLTIMTGLTENNRPELMAAFLDEVVEDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMVFLQFQPNEQTYLSLIHGYVSAEKYFNVLMLWNEVKKRTPTGDSNGFKLDQTLIDAFLYALVKGGFFDAVMQVVDKSQELKIFVDKWRYKQAFMESHKKLKISKLRRRNFRKMEALIAFKNWAGLNA*

Click here to download the sequence:
Link to NCBI Protein BLAST