Transcript Information: S_Transcript_86260.p1


Annotated TAIR IDAT1G69290.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:26047372-26049348 | Reverse length=658
E-Value6.4E-106
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.45964144911489
Replicate 30.30737893472668
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 11.0012238266522
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86260.p1 GENE.S_Transcript_86260~~S_Transcript_86260.p1 ORF type:5prime_partial len:240 (+),score=51.28,PPR|PF01535.16|1e+03,PPR|PF01535.16|0.027,PPR|PF01535.16|0.76,PPR|PF01535.16|4.6,PPR|PF01535.16|36,PPR|PF01535.16|9.4e-07,PPR_2|PF13041.2|7.6e+02,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|0.0047,PPR_2|PF13041.2|0.047,PPR_2|PF13041.2|2.6e+03,PPR_2|PF13041.2|1.2e-07,PPR_3|PF13812.2|8.8e+03,PPR_3|PF13812.2|15,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|0.0033,PPR_3|PF13812.2|13,PPR_3|PF13812.2|2.7e-05,PPR_1|PF12854.3|35,PPR_1|PF12854.3|0.28,PPR_1|PF12854.3|23,PPR_1|PF12854.3|2.9e-08 S_Transcript_86260:3-722(+)
AGTGAGGAGGTTTACTGTGAAATGGTGAATGGATTTCTAACACATGGAAATATCAAGGATTTAGCTGCGCTGATTGTTGAAGCTCAATTGTTGGAACCTGAATCTGTCATCGCGGAAAAGTCTATTGGTTTTGGCATTATTAGTGCTTGTGTTAATCTCAGGATGTTGGATAAGGCTCATAGTATATTAGATGAGATGAACGCTCAGGGTGCTGCCGTTGGACTTGGGGTCTATTTGTCAATCTTAAGGGCCTACTGTAAAGAGCAGAGAACAGCTGAAGCTGCTCAATTGGTTGCTGAGATTAGTGGTTCTGGCCTCCAATTGGATGCTAGCCGTTATGATGCATTAATAGAAGCATCTATGTCGAGCCAGGATTTTCAGTCTGCTTTTTCATTGTATAGGGACATGAGGAATGCAAGAATTTATGAATTGAAAGGAAGCTACCTTACTATAATGACTGGATTAACTGAAAATAATCGTCCTGAATTGATGGCAGCCTTCTTGGATGAGGTTGTTGAGGATCCTCGCATTGAAGTGGGAACGCATGATTGGAATTCTATTATACATGCTTTCTGTAAGGCTGGTCGGCTAGAAGATGCTAGGAGGACTTTTAGGAGGATGGTCTTTCTGCAATTTCAACCTAATGAGCACATATTTGTCCTTGATCCATGGTTATGTATCTGCAGAAAAGTACTTCAATGTGTTGATGCTATGGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86260.p1 GENE.S_Transcript_86260~~S_Transcript_86260.p1 ORF type:5prime_partial len:240 (+),score=51.28,PPR|PF01535.16|1e+03,PPR|PF01535.16|0.027,PPR|PF01535.16|0.76,PPR|PF01535.16|4.6,PPR|PF01535.16|36,PPR|PF01535.16|9.4e-07,PPR_2|PF13041.2|7.6e+02,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|0.0047,PPR_2|PF13041.2|0.047,PPR_2|PF13041.2|2.6e+03,PPR_2|PF13041.2|1.2e-07,PPR_3|PF13812.2|8.8e+03,PPR_3|PF13812.2|15,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|0.0033,PPR_3|PF13812.2|13,PPR_3|PF13812.2|2.7e-05,PPR_1|PF12854.3|35,PPR_1|PF12854.3|0.28,PPR_1|PF12854.3|23,PPR_1|PF12854.3|2.9e-08 S_Transcript_86260:3-722(+)
SEEVYCEMVNGFLTHGNIKDLAALIVEAQLLEPESVIAEKSIGFGIISACVNLRMLDKAHSILDEMNAQGAAVGLGVYLSILRAYCKEQRTAEAAQLVAEISGSGLQLDASRYDALIEASMSSQDFQSAFSLYRDMRNARIYELKGSYLTIMTGLTENNRPELMAAFLDEVVEDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMVFLQFQPNEHIFVLDPWLCICRKVLQCVDAME*

Click here to download the sequence:
Link to NCBI Protein BLAST