Transcript Information: S_Transcript_86357.p1


Annotated TAIR IDAT5G48800.1
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19786881-19789003 | Forward length=614
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.760868931362
Replicate 29.1838603686566
Replicate 36.9872479796405
Condition 2: 8 Hour
Replicate 118.724732961385
Replicate 215.096450708108
Replicate 319.998770842397
Condition 3: 24 Hour
Replicate 110.016678283492
Replicate 29.3234867135218
Replicate 311.360172845882


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86357.p1 GENE.S_Transcript_86357~~S_Transcript_86357.p1 ORF type:complete len:615 (+),score=98.34,NPH3|PF03000.10|3.1e-87,BTB|PF00651.27|1.8e-06 S_Transcript_86357:330-2174(+)
ATGGACAGGAGTGATAAGCAGCAACTTCCCCTTCCCAAAGCCTCTCGCCAGCGCTGCAACGAATGGATATTTAGGGATGTCCCAAGTGATATCACTATCGAAGTGACCGGAGGGACATTCGCACTTCATAAGTTCCCTCTGGTCTCTCGAAGTGGAAGAATACGCAAGTTAGTGGCAGAGCACCGGGATTCAGACATGACAAAGGTCGAACTCCACAACCTACCTGGGGGTGCAGAAGCATTCGAGCTGGCAGCAAAGTTTTGCTATGGGATCAACTTTGAGATCACGCCTGCCAATGTCGCGCAGCTCTGTTGTGTCTCTGACTACCTTGAGATGACAGACAATTATACGAAAGATAGCGTTGGATCTCGAGCTGAAGAGTACCTTGAGAGTGTTGTCTGCAAGAACCTAGAAATGTGTGTGGAAGTCCTAAAGCAATGTGAAAACCTTCTCCCACTTGCTGACGAGCTGAAAATAGTTAGCAGGTGCATTGACGCGATAGCCTCCAAGGCATGTGCGGAGCAAATAGCTTCAAGCTTCTCGAGGCTGGAATATAGCAGCTCTGGTAGGCTTCACATGAGCCGTCCTGTCAAATGTGAAGGCGACTGGTGGATAGAGGATCTTTCGATTCTCCGAGTAGATTTGTATCAGAGGGTTATAACTGCAATGAAATGTAGAGGGGTTAGGCCGGAGAGTATTGGTGCTTCACTGATAAATTATGCAGAAAAAGAGCTGACAAAAAAAGTGAGTTCATGGAATGCTAGTTCTGGTCAATCAAGACCTGATGTCATTTCCGAGTCTGGTAACCAAGAAAGAATCGTGGTCGAAACAATTATCAGTCTTTTGCCTGTAGAGAAACTAGTTGTGTCAATCAGTTTCCTGTTTGGACTCCTCCGAAGTGCTATTTTGCTCGACTGTTCTGTTGCCAGCAGGCTTGATCTCGAGAGGAGGATTGGCTCTCAGTTAGATCTAGCCACTCTCAATGATCTTTTGATCCCTTCATTTCGACATGCTGGAGATACTTTATTCGATGTGGACACGGTCCATAGGATCCTGGTGAGCTTCTCCCAGCAAGATGATAGTGAAGACGAGCTGGACGATGCCTCGGTTTTTGAATCAGATAGTCCTCAGTCACCTTCACAAGGTGCCTTGTACAAGGTCTCGAAAATGGTGGACAATTACCTTGCTGAGATTGCACCAGATGCAAACCTCAAGCTGAACAAGTTCATGGTCATCGCAGAAGCTTTGCCATCTCATGCACGAACTATTCATGATGGGTTATATCGTGCCATCGACATATATCTCAAGGCACACCCGGGATTACCAGACGCAGAGAAGAGGAAGCTCTGCAAGCTGATAGACTTCCAGAAGCTGTCACAAGAAGCAGGTGCACACGCAGCCCAAAACGAGAGGCTTCCACTCCAATCAATAGTACAAGTGCTGTACTTTGAGCAACTAAGACTCCGGAATGCACTATCCTGCTCTTTCCCAGAAGAGGAACCTAAGCCGATGTTTCACTCATGGCGTGTCAACAGTGGAGCTCTCAGTGCATCAATGTCTCCTAAAGACAACTACGCGTCACTAAGGAGAGAGAATCGGGAGCTGAAGTTGGAACTAGCTCGCATGAGAATGAGACTTAATGATCTCGAGAAGGAGCATGTCTGTATGAAGAGGACCATGGAGAAATCTGGTTCTCGTAAATTTATGAGCTCTTTCTCGAAGAAGATTGGGAAGCTGAGCTTCTTTGCACATAGTTCTTCTAGGGAATCACGTGGATCGAGTTCTCCTTCCCCTTCAAGGCAATCACAGAGGACAGACTCTAAGGTGACTGATAGAACATATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86357.p1 GENE.S_Transcript_86357~~S_Transcript_86357.p1 ORF type:complete len:615 (+),score=98.34,NPH3|PF03000.10|3.1e-87,BTB|PF00651.27|1.8e-06 S_Transcript_86357:330-2174(+)
MDRSDKQQLPLPKASRQRCNEWIFRDVPSDITIEVTGGTFALHKFPLVSRSGRIRKLVAEHRDSDMTKVELHNLPGGAEAFELAAKFCYGINFEITPANVAQLCCVSDYLEMTDNYTKDSVGSRAEEYLESVVCKNLEMCVEVLKQCENLLPLADELKIVSRCIDAIASKACAEQIASSFSRLEYSSSGRLHMSRPVKCEGDWWIEDLSILRVDLYQRVITAMKCRGVRPESIGASLINYAEKELTKKVSSWNASSGQSRPDVISESGNQERIVVETIISLLPVEKLVVSISFLFGLLRSAILLDCSVASRLDLERRIGSQLDLATLNDLLIPSFRHAGDTLFDVDTVHRILVSFSQQDDSEDELDDASVFESDSPQSPSQGALYKVSKMVDNYLAEIAPDANLKLNKFMVIAEALPSHARTIHDGLYRAIDIYLKAHPGLPDAEKRKLCKLIDFQKLSQEAGAHAAQNERLPLQSIVQVLYFEQLRLRNALSCSFPEEEPKPMFHSWRVNSGALSASMSPKDNYASLRRENRELKLELARMRMRLNDLEKEHVCMKRTMEKSGSRKFMSSFSKKIGKLSFFAHSSSRESRGSSSPSPSRQSQRTDSKVTDRTY*

Click here to download the sequence:
Link to NCBI Protein BLAST