Transcript Information: S_Transcript_86403.p1


Annotated TAIR IDAT5G52810.1
Annotated Gene NameNAD(P)-binding Rossmann-fold superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21399524-21400501 | Forward length=325
E-Value3.5E-134
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.1863000367995
Replicate 26.6122900454273
Replicate 36.2935152807539
Condition 2: 8 Hour
Replicate 110.124814393891
Replicate 29.5594842852244
Replicate 310.626297915836
Condition 3: 24 Hour
Replicate 110.760387713468
Replicate 29.9532466270012
Replicate 311.301272122174


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86403.p1 GENE.S_Transcript_86403~~S_Transcript_86403.p1 ORF type:complete len:337 (+),score=80.51,OCD_Mu_crystall|PF02423.11|1.5e-58,Shikimate_DH|PF01488.16|9.9e+03,Shikimate_DH|PF01488.16|6.7e-11 S_Transcript_86403:208-1218(+)
ATGGCAGCGACACCATCTTCCACCATCACTCCCATATTCATCTCCAACAAAACCCTCCATTCAATCCTTTCCCACAAAACCCTGATTGCCCATTTCAAATCAACTCTCCCAGATGCCTCTATTTCTATCTCAACCCCACCACGGCATTCTCACTCAACCTCCCCAAATACCTCTCTTCTCTTAATGCCTTCTTTCCCAACCACACCTCCTTCTGTCCCTTACATTGGGGTCAAACTAGTCACTACCCACCCTCAAAATTCCACCATTAACTTGCCTGGCATTCATGCTAGCTACGTTCTCTTCAGTGCCACTACAGGCCAAACCCTAGCCTTGTTTGATGCTACGGATCTTACCCTTTTCAGGACTTCGTCTGTTTCAGCTTTAGCTTCCTCATATTTGTCAAACCCTGATGCCCAAGTGCTTGTCATGGTGGGTGCTGGGAACTTATCCCCACATTTGATCACTGCCCATTTGTGTATTAGGCCTAGTATTAAGAGGGTGATCATATGGAACCGTACTGCTGAGAAAGCGGCGCAATTGGCGGCGAGGTTGAGTGGAGAGAGTGGGTTTGAAGGGGTGAGTTTTGAGAGTAGTGGGTGCTTGGAGGAGGTGATTGGGTTAGGGGATATTGTGAGTTGCGCCACGAATTCGGAGGCACCATTGGTGAAGGGTGAGAGGTTGAAGAATGGAGCTCATCTCGATCTCGTTAGCTCATTTAAGCCAACGATGAAGGAGTGTGATGATGAGGCACTAAGGAGGGGGAGAGTGTTTGTTGATAATGAGGTTGCTTTGGAGGAAGCAGGGGAATTGGTGGGTGCTTTTGAGAGGGGAGTGATTTCAAGGGATGATGTTTGTGCAAGTTTGGTGGAATTAATTAAAGGGGAGAAGGTTGAGAGGAAGAATGAGAGTGAGATTACTGTGTTCAAGTCTGTTGGTTCTGGGGTTGTTGATCTTCTAACTGCCCAGTTGGTGTATGAAACTCTTAAAGATCAACAGGATCAGCAGCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86403.p1 GENE.S_Transcript_86403~~S_Transcript_86403.p1 ORF type:complete len:337 (+),score=80.51,OCD_Mu_crystall|PF02423.11|1.5e-58,Shikimate_DH|PF01488.16|9.9e+03,Shikimate_DH|PF01488.16|6.7e-11 S_Transcript_86403:208-1218(+)
MAATPSSTITPIFISNKTLHSILSHKTLIAHFKSTLPDASISISTPPRHSHSTSPNTSLLLMPSFPTTPPSVPYIGVKLVTTHPQNSTINLPGIHASYVLFSATTGQTLALFDATDLTLFRTSSVSALASSYLSNPDAQVLVMVGAGNLSPHLITAHLCIRPSIKRVIIWNRTAEKAAQLAARLSGESGFEGVSFESSGCLEEVIGLGDIVSCATNSEAPLVKGERLKNGAHLDLVSSFKPTMKECDDEALRRGRVFVDNEVALEEAGELVGAFERGVISRDDVCASLVELIKGEKVERKNESEITVFKSVGSGVVDLLTAQLVYETLKDQQDQQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST