Transcript Information: S_Transcript_8643.p1


Annotated TAIR IDAT1G80130.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:30141250-30142478 | Reverse length=305
E-Value2E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.4822314693802
Replicate 214.679226518346
Replicate 310.507216175119
Condition 2: 8 Hour
Replicate 148.173292070974
Replicate 236.187133656291
Replicate 334.479020428775
Condition 3: 24 Hour
Replicate 134.725531923295
Replicate 218.78116656526
Replicate 322.709888587874


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_8643.p1 GENE.S_Transcript_8643~~S_Transcript_8643.p1 ORF type:complete len:251 (+),score=53.39,TPR_16|PF13432.2|0.23,TPR_16|PF13432.2|1.5e-05,TPR_14|PF13428.2|0.49,TPR_14|PF13428.2|0.48,TPR_14|PF13428.2|4.4,TPR_17|PF13431.2|1.2e+04,TPR_17|PF13431.2|0.00017,TPR_17|PF13431.2|0.24,TPR_17|PF13431.2|3.6e+03,TPR_12|PF13424.2|1.1e-05 S_Transcript_8643:159-911(+)
ATGTTGTTAAGGAGTTCATCAACCCCAATCTTAAACTCATGGATGCCTCATCATCATCATACACCTTATCCTAGAGAATCATCTCCAGATAATATTAACAACCACAATAACAACAATAATAATAATAGCAATGACCTTTCTCTACATCATGTCCTTCCTAGGAGTAAATCCAATATTACCACCACCCTTACAACTTCTTCCTCTACTTCTCCTTGTCAATCTCCCACCCACCAATCAAAACTTGCCACGCGTACGCTTTCCGACACCAACCTCCCTCCCCACACCGCCACCACCACGCGCCTCCAACGCCTCTTCTCAAGCTCCGGCCTAGACGAACCTGCCGAGGAGGAGGTGAGAAAGAAGATGGAGTTGGCTGCGTTGGTTGAAGGCGGCGGCTGTGGCGGTGGTGGCAGAAGTGGTGGTTGTTGCGGTGGTGGTGGTGGTGGCTCAGAGTTTCATGAGTATGGTAATAGTAGTAATGAGCATGAGAGTGTTGAAGCTTATTATCAGAAAATGATCAAGGCTAATCCTGGAAATGCACTCTTGCTTGGTAATTATGCTAGGTTCTTGAAAGAGGAACGTGGAGATTTAGCTAAAGCAGAGGAATATTGTGGAAGATCAATTTTAAACAATCCAGGAGATGCAAATTTGCTATCCCTCTATGCTGATATCATTTGGCAAACCCAAAAGGATGCTCAGCGTGCCGAGATCTACTTTGATCAGGCTGTTAAAACTGCTCCCGATGACTCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_8643.p1 GENE.S_Transcript_8643~~S_Transcript_8643.p1 ORF type:complete len:251 (+),score=53.39,TPR_16|PF13432.2|0.23,TPR_16|PF13432.2|1.5e-05,TPR_14|PF13428.2|0.49,TPR_14|PF13428.2|0.48,TPR_14|PF13428.2|4.4,TPR_17|PF13431.2|1.2e+04,TPR_17|PF13431.2|0.00017,TPR_17|PF13431.2|0.24,TPR_17|PF13431.2|3.6e+03,TPR_12|PF13424.2|1.1e-05 S_Transcript_8643:159-911(+)
MLLRSSSTPILNSWMPHHHHTPYPRESSPDNINNHNNNNNNNSNDLSLHHVLPRSKSNITTTLTTSSSTSPCQSPTHQSKLATRTLSDTNLPPHTATTTRLQRLFSSSGLDEPAEEEVRKKMELAALVEGGGCGGGGRSGGCCGGGGGGSEFHEYGNSSNEHESVEAYYQKMIKANPGNALLLGNYARFLKEERGDLAKAEEYCGRSILNNPGDANLLSLYADIIWQTQKDAQRAEIYFDQAVKTAPDDS*

Click here to download the sequence:
Link to NCBI Protein BLAST