Transcript Information: S_Transcript_8644.p1


Annotated TAIR IDAT5G20190.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6814093-6815171 | Forward length=290
E-Value5E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9959424701422
Replicate 28.124204096991
Replicate 35.7924838962933
Condition 2: 8 Hour
Replicate 17.4677359594292
Replicate 24.5228286058653
Replicate 34.0784834767654
Condition 3: 24 Hour
Replicate 17.6496523414716
Replicate 27.5273309206641
Replicate 310.289137248297


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_8644.p1 GENE.S_Transcript_8644~~S_Transcript_8644.p1 ORF type:3prime_partial len:277 (+),score=59.58,TPR_17|PF13431.2|1.3e+04,TPR_17|PF13431.2|0.00019,TPR_17|PF13431.2|0.27,TPR_17|PF13431.2|0.66,TPR_14|PF13428.2|0.56,TPR_14|PF13428.2|0.56,TPR_14|PF13428.2|0.31,TPR_16|PF13432.2|0.27,TPR_16|PF13432.2|1.7e-05,TPR_19|PF14559.2|6.1e-05,TPR_19|PF14559.2|5.2,TPR_11|PF13414.2|0.017,TPR_11|PF13414.2|0.012,TPR_12|PF13424.2|0.087,TPR_12|PF13424.2|1.3e-05 S_Transcript_8644:181-1008(+)
ATGTTGTTAAGGAGTTCATCAACCCCAATCTTAAACTCATGGATGCCTCATCATCATCATCATCATACACCTTATCCTAGAGAATCATCTCCAGATAACATTAACAATCACAACAATAATAATAGTAATGACTTTTCTCTAAATCATCATGTCCTTCCTAGGAGTAAATCCAATATTACCACCACCCTCACAACTTCTTCTAATACTTCTCCTTGTCACTCTCCCACCCACCAATCAAAACTTGCCACGCGTACTCTTTCCGACGCCGACCTCCGTCCTCACACCACCACGCGCCTCCAACGCCTCTTCTCAAGCTCCGGCCCTGCCGAGGAGGAGGTGAGAAAGAAGATGGAGTTGGCTGCGTTGGTTGAAGGCGGCGGCTGTGGCGGTGGTGGCAGAAGTGGTGGTTGTTGCGGTGGTGGTGGTGGTGGCTCAGAGTTTCATGAGTATGGTAATAGTAGTAATGAGCATGAGAGTGTTGAAGCTTATTATCAGAAAATGATCAAGGCTAATCCTGGAAATGCACTCTTGCTTGGTAATTATGCTAGGTTCTTGAAAGAGGAACGTGGAGATTTAGCTAAAGCAGAGGAATATTGTGGAAGATCAATTTTAAACAATCCAGGAGATGCAAATTTGCTATCCCTCTATGCTGATATCATTTGGCAAACCCAAAAGGATGCTCAGCGTGCCGAGATCTACTTTGATCAGGCTGTTAAAACTGCTCCCGATGACTCGTATGTTTATGCATCATACGCAAAATTTCTATGGGATGTGGAAGATGAGGAGGAACATGAGGAAAGACAACATGAAAAATTTGAAAGTCCAAGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_8644.p1 GENE.S_Transcript_8644~~S_Transcript_8644.p1 ORF type:3prime_partial len:277 (+),score=59.58,TPR_17|PF13431.2|1.3e+04,TPR_17|PF13431.2|0.00019,TPR_17|PF13431.2|0.27,TPR_17|PF13431.2|0.66,TPR_14|PF13428.2|0.56,TPR_14|PF13428.2|0.56,TPR_14|PF13428.2|0.31,TPR_16|PF13432.2|0.27,TPR_16|PF13432.2|1.7e-05,TPR_19|PF14559.2|6.1e-05,TPR_19|PF14559.2|5.2,TPR_11|PF13414.2|0.017,TPR_11|PF13414.2|0.012,TPR_12|PF13424.2|0.087,TPR_12|PF13424.2|1.3e-05 S_Transcript_8644:181-1008(+)
MLLRSSSTPILNSWMPHHHHHHTPYPRESSPDNINNHNNNNSNDFSLNHHVLPRSKSNITTTLTTSSNTSPCHSPTHQSKLATRTLSDADLRPHTTTRLQRLFSSSGPAEEEVRKKMELAALVEGGGCGGGGRSGGCCGGGGGGSEFHEYGNSSNEHESVEAYYQKMIKANPGNALLLGNYARFLKEERGDLAKAEEYCGRSILNNPGDANLLSLYADIIWQTQKDAQRAEIYFDQAVKTAPDDSYVYASYAKFLWDVEDEEEHEERQHEKFESPS

Click here to download the sequence:
Link to NCBI Protein BLAST